Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is 187732132

Identifier: 187732132

GI number: 187732132

Start: 1462880

End: 1463311

Strand: Direct

Name: 187732132

Synonym: SbBS512_E1608

Alternate gene names: NA

Gene position: 1462880-1463311 (Clockwise)

Preceding gene: 187732651

Following gene: 187731577

Centisome position: 31.69

GC content: 50.0

Gene sequence:

>432_bases
TTGTCTAATTCGTCAGATTCTGACCAGACGGTTCAGGCTGTACGCTTACAGTTGATGCAGTCGTTGTACGACTGGATACA
GTTGCAGAGGAAAACGCTGTCGAAACATGCGGAGATGGCGAAGGCGTTCGACTATATCCTGAATCACTGGAATGCGCTGA
ACGAGTTCTGTCGTGACGGCTGGGTGGAAATAGACAACAACATCGGTGAAAACGCGTTACGATCGGTGGCGGTTGGAAGA
AAAAATTATCTCTTTTTCGGCTCAGACAAGGGAGGAGAAAGTGCGGCGATCATCTACAGTCTGCTGGTCACCTGCAAACA
GAACGAAGTGGAGCCGGAGGACTGGTTGCGCGAAGTGATCGAGAAGCTCAATGACTGGCCGTCGAACCAAGTGCATGAAC
TGCTGCCCTGGAACTTCTCGTCTGTAAAATAA

Upstream 100 bases:

>100_bases
TTCGGGAGGATAATTAGGGCAGCCTTTTCGCCTGCCGGGATTCACATTTTTCTGCATATCTGACACTTTGGTTCCCACTA
CTTATTTGGTGGACACCACT

Downstream 100 bases:

>100_bases
TCCTTACGCTACGTACTTCTCGGGGCGCTTACGATTTATCGCCGTCAGCGGGAGCTGAAGGAAGAGCTGAATAGTCTGAA
GGATTTGAATTCGGTTAGGA

Product: transposase family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSNSSDSDQTVQAVRLQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGR
KNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK

Sequences:

>Translated_143_residues
MSNSSDSDQTVQAVRLQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGR
KNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK
>Mature_142_residues
SNSSDSDQTVQAVRLQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGRK
NYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 25 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004291 [H]

Pfam domain/function: PF03050 Transposase_25 [H]

EC number: NA

Molecular weight: Translated: 16538; Mature: 16406

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSSDSDQTVQAVRLQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVI
CEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
EKLNDWPSNQVHELLPWNFSSVK
HHHHCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNSSDSDQTVQAVRLQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
WVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVI
CEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHH
EKLNDWPSNQVHELLPWNFSSVK
HHHHCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]