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The map label for this gene is yhiR

Identifier: 187732108

GI number: 187732108

Start: 3548890

End: 3549732

Strand: Reverse

Name: yhiR

Synonym: SbBS512_E3823

Alternate gene names: 187732108

Gene position: 3549732-3548890 (Counterclockwise)

Preceding gene: 187733591

Following gene: 187731209

Centisome position: 76.9

GC content: 55.16

Gene sequence:

>843_bases
ATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCGACGTCCTTAAACATACCGTTCAGAGCCTGATCATCGA
GTCGCTGAAAGAGAAAGATAAACCGTTTCTCTATCTCGACACCCACGCAGGGGCCGGGCGTTATCAGTTAGGCAGCGAAC
ATGCCGAGCGTACCGGCGAATATCTCGAAGGCATCGCCCGTATCTGGCAGCAGGACGATTTGCCCGCAGAACTGGAGGCG
TACATCAATGTGGTAAAACACTTCAACCGTAGCGGTCAGTTGCGTTACTACCCCGGTTCGCCATTGATTGCTCGCCAGCT
ACTGCGCGAACAAGACAGCCTGCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGCTGCGTTCTGAATTTCAGAAAG
ACAGCCGTGCGCGCGTCGAAAAAGCCGATGGTTTCCAGCAGCTTAAGGCCAAACTGCCGCCGGTTTCCCGCCGTGGTTTA
ATCCTTATCGACCCGCCGTATGAAATGAAAACCGACTATCAGGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTT
CGCCACTGGTACTTACGCACTGTGGTATCCGGTGGTGCTGCGTCAGCAAATTAAGCGCATGCTCCACGATCTGGAAGCGA
CCGGTATTCGCAAAATTCTGCAAATTGAACTGGCGGTACTGCCAGACAGCGATCGCCGTGGCATGACCGCTTCCGGCATG
ATTGTGATTAACCCGCCGTGGAAACTGGAACAGCAGATGAATAACGTGCTGCCGTGGCTGCACAGCAAACTGGTTCCGGC
AGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCGGAGTAA

Upstream 100 bases:

>100_bases
ACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTAC
TTACCGGAACACCTTTACCC

Downstream 100 bases:

>100_bases
TTGCAGCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACACTCTGTCATGACTAAA
CACTATGATTACATCGCCAT

Product: DNA utilization protein YhiR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEA
YINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMLHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE

Sequences:

>Translated_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEA
YINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMLHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
>Mature_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEA
YINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMLHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=98.9285714285714, Blast_Score=570, Evalue=1e-164,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 31945; Mature: 31945

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEECC
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH
AEGYKRFATGTYALWYPVVLRQQIKRMLHDLEATGIRKILQIELAVLPDSDRRGMTASGM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCE
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
EEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
YLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEECC
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH
AEGYKRFATGTYALWYPVVLRQQIKRMLHDLEATGIRKILQIELAVLPDSDRRGMTASGM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCE
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
EEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]