| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is 187732086
Identifier: 187732086
GI number: 187732086
Start: 2586989
End: 2587114
Strand: Direct
Name: 187732086
Synonym: SbBS512_E2788
Alternate gene names: NA
Gene position: 2586989-2587114 (Clockwise)
Preceding gene: 187732201
Following gene: 187730888
Centisome position: 56.04
GC content: 54.76
Gene sequence:
>126_bases TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG TAGCGGAGCAAGAGGCGGGCAAGAGTTTTTGCTGCCTGCGCATTGA
Upstream 100 bases:
>100_bases CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG GCGGTGTAAGTGAACTGTAG
Downstream 100 bases:
>100_bases TAATCTTGAGTTTATGAGTCGTCATTACGGCTTAATGATGCGCGTTCACTGTATCCGCTCAATTTGCCGTACGCTGCTGC CGTTGATGCAGGAAAACGAA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGARGGQEFLLPAH
Sequences:
>Translated_41_residues MPCFTAMRAEIALMSGSAFAVTHHAFSSGARGGQEFLLPAH >Mature_40_residues PCFTAMRAEIALMSGSAFAVTHHAFSSGARGGQEFLLPAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4307; Mature: 4176
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCFTAMRAEIALMSGSAFAVTHHAFSSGARGGQEFLLPAH CCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEECCC >Mature Secondary Structure PCFTAMRAEIALMSGSAFAVTHHAFSSGARGGQEFLLPAH CCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA