Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

Click here to switch to the map view.

The map label for this gene is yfeK [H]

Identifier: 187732076

GI number: 187732076

Start: 2590662

End: 2591030

Strand: Direct

Name: yfeK [H]

Synonym: SbBS512_E2792

Alternate gene names: 187732076

Gene position: 2590662-2591030 (Clockwise)

Preceding gene: 187730888

Following gene: 187731437

Centisome position: 56.12

GC content: 47.15

Gene sequence:

>369_bases
ATGAAGAAAATCATTTGTCTGGTCATTACACTACTAATGACACTCCCCGCTTACGCGAAGTTAACTGCCCATGAAGAAGC
CCGCATCAACGCCATGCTGGAGGGATTATCACAGAAAAAGGATTTGATATTTGTGCGCAACGGTGATGAACATACCTGCG
ATGAAGCGGTTTCTCATCTGCGTCTGAAGCTCGGCAATACCCGTAACCGCATTGACACTGCCGAGCAGTTTATTGATAAG
GTTGCTTCGTCGTCATCGATTACCGGGAAGCAGTATATTGTGAAGATCCCCGGTAAGAGCGATGAGAACGCACAGCCTTT
TTTACATGCGCTAATTGCGCAGACGGATAAAACGGTGCCTGCGCAATAA

Upstream 100 bases:

>100_bases
TTTTTTCTCCTTGCCGATGATCCTCATCGTATTCCAACCGAAACTTTACCTGATTCTGGCAGTCAAATCGGCTATTACAA
AACAAGGATAAGGTAATTCA

Downstream 100 bases:

>100_bases
TCTTAAATCCCCGCCCCCTGGCTAAAATGCTCTTCCCCAAACACTCCGGTGGAGAGGTAGCGATCGCCACGATCGCAGAT
GATCGCTACCACCACCGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIFVRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDK
VASSSSITGKQYIVKIPGKSDENAQPFLHALIAQTDKTVPAQ

Sequences:

>Translated_122_residues
MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIFVRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDK
VASSSSITGKQYIVKIPGKSDENAQPFLHALIAQTDKTVPAQ
>Mature_122_residues
MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIFVRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDK
VASSSSITGKQYIVKIPGKSDENAQPFLHALIAQTDKTVPAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788759, Length=122, Percent_Identity=95.9016393442623, Blast_Score=242, Evalue=6e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13531; Mature: 13531

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIFVRNGDEHTCDEAVSHL
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
RLKLGNTRNRIDTAEQFIDKVASSSSITGKQYIVKIPGKSDENAQPFLHALIAQTDKTVP
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
AQ
CC
>Mature Secondary Structure
MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIFVRNGDEHTCDEAVSHL
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH
RLKLGNTRNRIDTAEQFIDKVASSSSITGKQYIVKIPGKSDENAQPFLHALIAQTDKTVP
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCC
AQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8764513 [H]