| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187731966
Identifier: 187731966
GI number: 187731966
Start: 1987994
End: 1988983
Strand: Reverse
Name: 187731966
Synonym: SbBS512_E2184
Alternate gene names: NA
Gene position: 1988983-1987994 (Counterclockwise)
Preceding gene: 187732643
Following gene: 187733580
Centisome position: 43.09
GC content: 48.99
Gene sequence:
>990_bases GTGGGAACAAGGGAAAACAAAAGCATCACCAACAATGCCACATTTGCGGCTGGTGGGCAATGTGATCAGTCAGATTTGGT TCGTTCCAAGGTTTGCAACGAGAGCTTTTTCCTGTGCTCTTTAAGGAATTTCTCAAGAGCAAACGAACAAGGTGCGAATC TTTCTGATTCATGTTCATGCGCTATATTTTTGCGTCGTCTCTTACGAGTTGGTGATGGTGTTTTGGTTGATTCTGTGTCG CTCATGGTGCTGTCCTGTAAAGCAATGCGCCTGCGTTCCTCAAACTATGGCGCTGATATTGGCTATTCATGCTCTTTGAC CTTGCGTCGCTGGAGTTCTTCACGCGCGACGGTGACGAGTTGCCCGATCTCCTCGGCTGCTTTGATGCCGATTTGTTCGA CCTTAGCCAGGGCATCCAGTGACGACACAAGGGGATTTTCTCCGCTGCCTTCTGCTTGGCGGCGGGCCATTTCTCCGCGC ATGGCGGTTACGATAAATCCGGCATTGCTTTCACCGTCCAGCTTAACGGATTCCATCCCTTGCATAACATCTAGTGGGAC TCTGACAGTTGTCAGTTGTGATTTTGCGTTTTTGTTAGCCGTTGCCATTTCTGAAACTCCTAATCATCGGTGTGTTTCAG TATACACAAAAAAAGAAATACAAAAAGCCTTGACGTGTGTTTCATGCGCTCATAACATGAAACACACCGAAAGGATTGTT GAAATACAAAGAGCAACGCCCCGCAGTGCTGGGAACACATACGGGGCGTCTAACCAACAACGTAAACTAGGAGCCGTTAT GGTTGCTGTAAATCATATACCACACCTTGTACACACACAAACGGCCTTTGTGTGGCGTTTTCTGGCACTGAGTGCCGGAG AATCTCAAATCATCCACGTAACCGCCTGGACGGAACGCGAAGCGCGTAGCCGTTGCCCGTCCGGTTGTGTTGCTGTATTC GCTGCAAAAATCCGCCAGGGAGTGAGGTAG
Upstream 100 bases:
>100_bases GAGGAAGAAGAAAAAACGCTGATACGTGAATATCAGCCTGAGTTTTACTTTGGTAACCGCATTCAGTGACAAAACAAAGG CGACCGCAAAAGGGTCGCCA
Downstream 100 bases:
>100_bases CCTGAGTTTAACGGACACTCCTTCCTGAAATAGAATGGCATCAGAAGGAGCTAATAATGAGCAGAAAAAACCAACGTTAC TCTAAAGAGTTCAAAGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MGTRENKSITNNATFAAGGQCDQSDLVRSKVCNESFFLCSLRNFSRANEQGANLSDSCSCAIFLRRLLRVGDGVLVDSVS LMVLSCKAMRLRSSNYGADIGYSCSLTLRRWSSSRATVTSCPISSAALMPICSTLARASSDDTRGFSPLPSAWRRAISPR MAVTINPALLSPSSLTDSIPCITSSGTLTVVSCDFAFLLAVAISETPNHRCVSVYTKKEIQKALTCVSCAHNMKHTERIV EIQRATPRSAGNTYGASNQQRKLGAVMVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARSRCPSGCVAVF AAKIRQGVR
Sequences:
>Translated_329_residues MGTRENKSITNNATFAAGGQCDQSDLVRSKVCNESFFLCSLRNFSRANEQGANLSDSCSCAIFLRRLLRVGDGVLVDSVS LMVLSCKAMRLRSSNYGADIGYSCSLTLRRWSSSRATVTSCPISSAALMPICSTLARASSDDTRGFSPLPSAWRRAISPR MAVTINPALLSPSSLTDSIPCITSSGTLTVVSCDFAFLLAVAISETPNHRCVSVYTKKEIQKALTCVSCAHNMKHTERIV EIQRATPRSAGNTYGASNQQRKLGAVMVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARSRCPSGCVAVF AAKIRQGVR >Mature_328_residues GTRENKSITNNATFAAGGQCDQSDLVRSKVCNESFFLCSLRNFSRANEQGANLSDSCSCAIFLRRLLRVGDGVLVDSVSL MVLSCKAMRLRSSNYGADIGYSCSLTLRRWSSSRATVTSCPISSAALMPICSTLARASSDDTRGFSPLPSAWRRAISPRM AVTINPALLSPSSLTDSIPCITSSGTLTVVSCDFAFLLAVAISETPNHRCVSVYTKKEIQKALTCVSCAHNMKHTERIVE IQRATPRSAGNTYGASNQQRKLGAVMVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARSRCPSGCVAVFA AKIRQGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35591; Mature: 35460
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRENKSITNNATFAAGGQCDQSDLVRSKVCNESFFLCSLRNFSRANEQGANLSDSCSC CCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCCHHH AIFLRRLLRVGDGVLVDSVSLMVLSCKAMRLRSSNYGADIGYSCSLTLRRWSSSRATVTS HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEE CPISSAALMPICSTLARASSDDTRGFSPLPSAWRRAISPRMAVTINPALLSPSSLTDSIP CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEECCHHCCCCCCCCCCC CITSSGTLTVVSCDFAFLLAVAISETPNHRCVSVYTKKEIQKALTCVSCAHNMKHTERIV EEECCCCEEEEEHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQRATPRSAGNTYGASNQQRKLGAVMVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHV HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEE TAWTEREARSRCPSGCVAVFAAKIRQGVR EECCCHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GTRENKSITNNATFAAGGQCDQSDLVRSKVCNESFFLCSLRNFSRANEQGANLSDSCSC CCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCCHHH AIFLRRLLRVGDGVLVDSVSLMVLSCKAMRLRSSNYGADIGYSCSLTLRRWSSSRATVTS HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEE CPISSAALMPICSTLARASSDDTRGFSPLPSAWRRAISPRMAVTINPALLSPSSLTDSIP CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEECCHHCCCCCCCCCCC CITSSGTLTVVSCDFAFLLAVAISETPNHRCVSVYTKKEIQKALTCVSCAHNMKHTERIV EEECCCCEEEEEHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQRATPRSAGNTYGASNQQRKLGAVMVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHV HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEE TAWTEREARSRCPSGCVAVFAAKIRQGVR EECCCHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA