| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yebV [H]
Identifier: 187731960
GI number: 187731960
Start: 1914600
End: 1914836
Strand: Direct
Name: yebV [H]
Synonym: SbBS512_E2104
Alternate gene names: 187731960
Gene position: 1914600-1914836 (Clockwise)
Preceding gene: 187732363
Following gene: 187731488
Centisome position: 41.48
GC content: 48.52
Gene sequence:
>237_bases ATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCGGGTGATCGAACGTT AACCATTCTTTGTAAATCTGACCCCGATTTATGTATGCAACTCGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGC TAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGA
Upstream 100 bases:
>100_bases GCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAACCGGCA GCTAAATGGAGAGCACGAAG
Downstream 100 bases:
>100_bases TCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGT ACGGCACCACACTTCGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MKTSVRIGAFEIDDGELHGESPGDRTLTILCKSDPDLCMQLDAWDAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA
Sequences:
>Translated_78_residues MKTSVRIGAFEIDDGELHGESPGDRTLTILCKSDPDLCMQLDAWDAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA >Mature_78_residues MKTSVRIGAFEIDDGELHGESPGDRTLTILCKSDPDLCMQLDAWDAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081986, Length=78, Percent_Identity=98.7179487179487, Blast_Score=160, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009950 - ProDom: PD060427 [H]
Pfam domain/function: PF07351 DUF1480 [H]
EC number: NA
Molecular weight: Translated: 8769; Mature: 8769
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSVRIGAFEIDDGELHGESPGDRTLTILCKSDPDLCMQLDAWDAETSIPALLNGEHSV CCCCEEEEEEECCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCEEE LYRTRYDQQSDAWIMRLA EEEECCCCCCCEEEEEEC >Mature Secondary Structure MKTSVRIGAFEIDDGELHGESPGDRTLTILCKSDPDLCMQLDAWDAETSIPALLNGEHSV CCCCEEEEEEECCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCEEE LYRTRYDQQSDAWIMRLA EEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]