Click here to switch to the map view.

The map label for this gene is 187731892

Identifier: 187731892

GI number: 187731892

Start: 4354173

End: 4354298

Strand: Reverse

Name: 187731892

Synonym: SbBS512_E4658

Alternate gene names: NA

Gene position: 4354298-4354173 (Counterclockwise)

Preceding gene: 187733889

Following gene: 187730601

Centisome position: 94.33

GC content: 42.06

Gene sequence:

>126_bases
GTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAGCGAGATATATTAAAAAA
AGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Upstream 100 bases:

>100_bases
GATCAGTGAAGGCGCTTCCCGATTATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCG
GTACTCCTGGTTCCCGCACG

Downstream 100 bases:

>100_bases
TCGAACAATGGCGACAACAATTTCCCATTGAAGCGATGTGTCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGG
GTACAGCATGAACCCTCAGA

Product: transposase family

Products: NA

Alternate protein names: ISO-S3 11 kDa protein [H]

Number of amino acids: Translated: 41; Mature: 40

Protein sequence:

>41_residues
MAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR

Sequences:

>Translated_41_residues
MAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
>Mature_40_residues
AELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 4793; Mature: 4661

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AELESEILQLRKALNEARLERDILKKATAYFAQESLKNTR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]