| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is fhuE
Identifier: 187731717
GI number: 187731717
Start: 2020164
End: 2022353
Strand: Direct
Name: fhuE
Synonym: SbBS512_E2222
Alternate gene names: 187731717
Gene position: 2020164-2022353 (Clockwise)
Preceding gene: 187733857
Following gene: 187733242
Centisome position: 43.76
GC content: 49.82
Gene sequence:
>2190_bases ATGCTTTCAACACAATTTAACAGGGATAATCAATATCAAGCCATCACCAAACCGTCACTACTTGCCGGTTGCATAGCACT GGCACTATTACCTTCTGCCGCTTTTGCTGCACCAGCCACTGAAGAAACGGTGATTGTTGAGGGTTCAGCCACAGCTCCAG ATGATGGCGAAAATGATTACAGCGTAACGTCTACCTCTGCGGGTACCAAAATGCAGATGACTCAACGTGATATTCCTCAG TCGGTCACTATTATTAGCCAGCAGCGGATGGAAGATCAGCAGTTACAAACGCTGGGCGAAGTGATGGAAAACACGCTGGG GATCAGCAAAAGTCAGGCGGATTCCGATCGTGCTCTTTATTATTCCCGCGGATTCCAGATCGATAACTATATGGTTGATG GTATCCCCACCTATTTTGAATCGCGCTGGAATCTGGGCGATGCACTTTCTGATATGGCACTGTTTGAACGCGTAGAAGTA GTGCGTGGCGCGACAGGACTCATGACCGGGACGGGTAATCCATCTGCGGCAATTGATATGGTTCGAAAACACGCGACCAG TCGTGAATTTAAAGGCGATGTCTCGGCGGAATACGGTAGCTGGAACAAAGAACGGTATGTGGCGGATTTACAAAGCCCAC TCACCGAAGACGGTAAAATCCGCGCGCGAATTGTCGGCGGCTACCAGAATAACGACTCATGGCTGGACCGCTACAACAGT GAAAAGACCTTCTTCTCCGGCATTGTCGATGCTGATTTAGGCGATCTTACGACGCTTTCAGCCGGTTACGAATATCAGCG CATTGATGTTAATAGCCCTACCTGGGGCGGTTTACCGCGCTGGAATACTGATGGCAGCAGCAACAGTTACGATCGTGCAC GCAGTACCGCACCTGACTGGGCGTACAACGATAAAGAGATCAACAAGGTCTTTATGACCCTGAAGCAGCGGTTTGCTGAT ACCTGGCAAGCGACACTGAATGCCACCCACTCTGAAGTCGAATTTGACAGCAAAATGATGTATGTCGATGCCTATGTAAA CAAAGCGGATGGTATGCTGGTTGGGCCATACAGTAATTATGGACCTGGCTTTGATTATGTCGGCGGCACCGGTTGGAACA GTGGCAAACGTAAAGTTGATGCGCTGGATTTGTTCGCTGACGGTAGTTATGAATTGTTTGGTCGTCAGCACAATCTAATG TTTGGTGGCAGTTACAGCAAACAAAACAATCGTTACTTCAGTTCATGGGCCAACATCTTCCCGGATGAAATTGGCAGTTT CTACAACTTTAATGGCAATTTCCCACAAACCGACTGGTCACCACAGAGCCTGGCACAGGACGATACCACACATATGAAAT CGTTATATGCTGCCACTCGAGTCACCCTTGCCGATCCGCTGCATCTGATCCTCGGCGCACGTTATACCAACTGGCGGGTT GATACGCTGACTTACAGCATGGAGAAAAACCACACCACGCCTTACGCTGGTCTGGTGTTTGACATCAATGACAACTGGTC GACCTACGCCAGCTATACCTCTATTTTCCAGCCGCAAAATGATCGTGACAGTTCAGGCAAATATCTGGCTCCAATCACCG GTAACAACTACGAGCTGGGTCTGAAATCGGACTGGATGAATAGCCGTCTGACCACCACGTTAGCCATCTTCCGTATTGAG CAGGATAATGTCGCTCAGTCCACCGGTACACCTATCCCCGGCAGCAACGGCGAAACCGCCTATAAAGCGGTGGATGGGAC AGTCAGTAAAGGGGTGGAATTTGAACTCAACGGCGCAATTACCGACAACTGGCAGCTGACATTTGGCGCAACGCGCTATA TTGCAGAGGATAACGAAGGAAACGCCGTTAATCCTAATCTGCCACGCACCACGGTTAAAATGTTCACCAGCTATCGGTTG CCTGTCATGCCAGAGTTGACAGTCGGCGGTGGTGTTAACTGGCAAAATCGCGTGTATACCGACACCGTGACACCGTATGG CACCTTCCGCGCCGAGCAAGGTAGCTACGCGCTGGTGGATCTCTTCACCCGCTACCAGGTGACGAAAAACTTCTCGTTAC AGGGGAACGTCAATAACCTGTTCGACAAAACCTACGATACCAACATGGAAGGTTCTATCGTCTACGGCGCACCGCGTAAT TTCAGCATTACCGGCACGTATCAATTCTGA
Upstream 100 bases:
>100_bases CATTTGCATTTACAAACAAAATTATTCGCACACTAAATATAATCGCTCATCACCCTCCTCCGGCATGAGCCTGACGACAA CATAAACCATGAGATTTCAA
Downstream 100 bases:
>100_bases ATAACACCTGTAAAAAAGGCAGCCATCTGGCAGCCTTAGTCTCCCCAACGTCTTACGGATTAGTGGTTACGGATGTACTC ATCCATCTCGGTTTTCAGGT
Product: ferric-rhodotorulic acid outer membrane transporter
Products: NA
Alternate protein names: Outer-membrane receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid [H]
Number of amino acids: Translated: 729; Mature: 729
Protein sequence:
>729_residues MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQ SVTIISQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV VRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFAD TWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLM FGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIE QDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRL PVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRN FSITGTYQF
Sequences:
>Translated_729_residues MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQ SVTIISQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV VRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFAD TWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLM FGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIE QDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRL PVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRN FSITGTYQF >Mature_729_residues MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDYSVTSTSAGTKMQMTQRDIPQ SVTIISQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV VRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFAD TWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLM FGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIE QDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRL PVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRN FSITGTYQF
Specific function: Required for the uptake of Fe(3+) via coprogen, ferrioxamine B, and rhodotorulic acid [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=729, Percent_Identity=99.3141289437586, Blast_Score=1497, Evalue=0.0, Organism=Escherichia coli, GI1786344, Length=288, Percent_Identity=24.6527777777778, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 81278; Mature: 81278
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDY CCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCCCCCCCCCC SVTSTSAGTKMQMTQRDIPQSVTIISQQRMEDQQLQTLGEVMENTLGISKSQADSDRALY EEEECCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE YSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAIDM EECCEEECCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH VRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS HHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHCCC EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDW CCHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC AYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCCEEECCCCCC GPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIF CCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEECCCCCCCCCCHHHHHHHCC PDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV HHHHCCEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHCCCCCCEEE DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELG EEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEC LKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAI CCCCCCCCHHEEEEEEEEECCCCCHHHCCCCCCCCCCCEEEEEECCHHHCCEEEEECCEE TDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYT ECCEEEEECEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEE DTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRN CCCCCCCCEECCCCCEEEEEHHHHHEEEECEEECCCHHHHHHCCCCCCCCCEEEEECCCC FSITGTYQF EEEEEEECC >Mature Secondary Structure MLSTQFNRDNQYQAITKPSLLAGCIALALLPSAAFAAPATEETVIVEGSATAPDDGENDY CCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEECCCCCCCCCCCCC SVTSTSAGTKMQMTQRDIPQSVTIISQQRMEDQQLQTLGEVMENTLGISKSQADSDRALY EEEECCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE YSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEVVRGATGLMTGTGNPSAAIDM EECCEEECCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH VRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDGKIRARIVGGYQNNDSWLDRYNS HHHHHCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHCCC EKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYDRARSTAPDW CCHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC AYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVNKADGMLVGPYSNY CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCCEEECCCCCC GPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIF CCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEECCCCCCCCCCHHHHHHHCC PDEIGSFYNFNGNFPQTDWSPQSLAQDDTTHMKSLYAATRVTLADPLHLILGARYTNWRV HHHHCCEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHEECCCCHHHHHCCCCCCEEE DTLTYSMEKNHTTPYAGLVFDINDNWSTYASYTSIFQPQNDRDSSGKYLAPITGNNYELG EEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEC LKSDWMNSRLTTTLAIFRIEQDNVAQSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAI CCCCCCCCHHEEEEEEEEECCCCCHHHCCCCCCCCCCCEEEEEECCHHHCCEEEEECCEE TDNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYT ECCEEEEECEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEE DTVTPYGTFRAEQGSYALVDLFTRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRN CCCCCCCCEECCCCCEEEEEHHHHHEEEECEEECCCHHHHHHCCCCCCCCCEEEEECCCC FSITGTYQF EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2162465; 8905232; 9278503; 3032906 [H]