| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187731465
Identifier: 187731465
GI number: 187731465
Start: 1555058
End: 1555183
Strand: Direct
Name: 187731465
Synonym: SbBS512_E1711
Alternate gene names: NA
Gene position: 1555058-1555183 (Clockwise)
Preceding gene: 187731709
Following gene: 187730831
Centisome position: 33.69
GC content: 50.0
Gene sequence:
>126_bases ATGGCAAAAGCACTGCCGGACATCAGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTCACTTACACC GCCTCTCAGCCCGGTACGCACCAGAAAATCATTGATATGGCCATGA
Upstream 100 bases:
>100_bases ACTTACTGATTTAGTGTATGATGGTGATTTTAAGGTGCTTGCGTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGC TACTGAAGGCGTGGTGCGTA
Downstream 100 bases:
>100_bases ATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTCCGTCACTTAAAAAACTCAGGC CGCAGTCGGTAACCTCGCGC
Product: IS1 transposase orfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 41; Mature: 40
Protein sequence:
>41_residues MAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP
Sequences:
>Translated_41_residues MAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP >Mature_40_residues AKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4401; Mature: 4270
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKALPDISAISALIAVKHGNYSSLTPPLSPVRTRKSLIWP CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA