| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is ymiA [H]
Identifier: 187731451
GI number: 187731451
Start: 1372793
End: 1372933
Strand: Direct
Name: ymiA [H]
Synonym: SbBS512_E1502
Alternate gene names: 187731451
Gene position: 1372793-1372933 (Clockwise)
Preceding gene: 187731082
Following gene: 187731908
Centisome position: 29.74
GC content: 48.94
Gene sequence:
>141_bases ATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTT TCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACTGCTGATTTGGAAAGTGTGGGGATAA
Upstream 100 bases:
>100_bases ATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGC TGATAAGTGATGGCGATTAT
Downstream 100 bases:
>100_bases CTATGGTCGGTCAGGAGCAACTGGAGTCGTCACCATTATGCCAGCATAGTGACAATGAAACAGAAACGAAACGGGAATGT TCCGTCGTTATTCCAGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG
Sequences:
>Translated_46_residues MRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG >Mature_46_residues MRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081865, Length=42, Percent_Identity=100, Blast_Score=86, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5337; Mature: 5337
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]