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The map label for this gene is rssA [H]

Identifier: 187731374

GI number: 187731374

Start: 1278137

End: 1279042

Strand: Direct

Name: rssA [H]

Synonym: SbBS512_E1399

Alternate gene names: 187731374

Gene position: 1278137-1279042 (Clockwise)

Preceding gene: 187730878

Following gene: 187732679

Centisome position: 27.69

GC content: 49.89

Gene sequence:

>906_bases
ATGAGAAAGATAAAAATAGGGCTGGCGCTGGGATCTGGCGCGGCGAGAGGTTGGTCGCATATTGGCGTTATTAATGCGCT
AAAAAAAGTGGGTATTGAAATTGATATCGTTGCAGGATGTTCAATTGGTTCGCTGGTGGGCGCTGCCTATGCATGCGATC
GATTATCTGCGCTGGAAGATTGGGTGACCTCTTTCAGTTATTGGGATGTTTTACGCCTGATGGATCTCTCCTGGCAGCGC
GGTGGGTTACTGCGCGGCGAGCGTGTCTTCAATCAATACCGCGAAATAATGCCGGAAACAGAGATCGAAAATTGTTCCCG
TCGCTTTGCGGCTGTTGCCACCAATTTAAGTACGGGACGTGAATTATGGTTTACTGAAGGCGATCTCCATCTTGCTATTC
GCGCATCATGCAGTATTCCAGGACTCATGGCACCTGTTGCACATAACGGCTACTGGCTGGTTGATGGAGCAGTAGTTAAC
CCAATTCCTATTTCCCTCACGCGTGCATTGGGGGCTGATATTGTGATAGCGGTCGACCTGCAGCACGATGCTCATTTGAT
GCAACAAGATTTGCTCTCCTTTAATGTCAGTGAAGAAAATAGCGAGAATGGTGAATCTTTGCCGTGGCATGCGCGTCTGA
AAGAAAGGTTAGGCAGTATAACAACACGTCGGGCGGTGACAGCGCCAACGGCAACAGAGATTATGACCACTTCTATCCAG
GTGCTGGAGAACCGCCTTAAAAGGAACCGCATGGCAGGTGATCCGCCCGATATTCTGATTCAACCTGTTTGCCCGCAAAT
ATCTACGCTTGATTTCCATCGCGCGCACGCTGCCATTGCGGCCGGACAGCTGGCAGTGGAAAGGAAAATGGACGAACTTT
TGCCGTTGGTACGCACCAACATTTGA

Upstream 100 bases:

>100_bases
TGGAAACAATAACGGCGTATTAACCGCCTGAGTTGCACTATGTTAACCGAGCAGTAGCGATGTGGCTACGATTGCATTCC
AGGGGAATCTTGCGGGAATA

Downstream 100 bases:

>100_bases
CCAGAATTTTTATCTACACTTAAGTTAATTCTGACAGGCGCAGGTGGCAATAGCATGCCACTATTGAGTAAAGCCAGTCA
GGGGAGAGAACATGACGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQR
GGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQ
VLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTNI

Sequences:

>Translated_301_residues
MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQR
GGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQ
VLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTNI
>Mature_301_residues
MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQR
GGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQ
VLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTNI

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=183, Percent_Identity=32.2404371584699, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI116256487, Length=183, Percent_Identity=32.2404371584699, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI260656043, Length=183, Percent_Identity=32.2404371584699, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI260656037, Length=183, Percent_Identity=32.2404371584699, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI260656039, Length=183, Percent_Identity=32.2404371584699, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI148727290, Length=182, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI148727335, Length=182, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=4e-20,
Organism=Escherichia coli, GI226510936, Length=301, Percent_Identity=99.6677740863787, Blast_Score=615, Evalue=1e-177,
Organism=Caenorhabditis elegans, GI193204778, Length=182, Percent_Identity=33.5164835164835, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71997289, Length=166, Percent_Identity=31.9277108433735, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI71997299, Length=166, Percent_Identity=31.9277108433735, Blast_Score=79, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6323581, Length=305, Percent_Identity=29.1803278688525, Blast_Score=103, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28571388, Length=190, Percent_Identity=31.5789473684211, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281376913, Length=190, Percent_Identity=31.5789473684211, Blast_Score=84, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 33082; Mature: 33082

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS01237 UPF0028

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALED
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
WVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGR
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
ELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDL
EEEEECCCEEEEEEECCCCCCCCCHHCCCCEEEECCCEECCCCHHHHHHCCCCEEEEEEC
QHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHEECCCCHHHHHHHHHH
VLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTN
HHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
I
C
>Mature Secondary Structure
MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGSLVGAAYACDRLSALED
CCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
WVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQYREIMPETEIENCSRRFAAVATNLSTGR
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
ELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVNPIPISLTRALGADIVIAVDL
EEEEECCCEEEEEEECCCCCCCCCHHCCCCEEEECCCEECCCCHHHHHHCCCCEEEEEEC
QHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLGSITTRRAVTAPTATEIMTTSIQ
CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHEECCCCHHHHHHHHHH
VLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAHAAIAAGQLAVERKMDELLPLVRTN
HHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]