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The map label for this gene is ytfT [H]

Identifier: 187731371

GI number: 187731371

Start: 4526070

End: 4527095

Strand: Reverse

Name: ytfT [H]

Synonym: SbBS512_E4854

Alternate gene names: 187731371

Gene position: 4527095-4526070 (Counterclockwise)

Preceding gene: 187733306

Following gene: 187733121

Centisome position: 98.07

GC content: 57.31

Gene sequence:

>1026_bases
GTGATGCCTCAATCTCTTCCGGACACCACTACGCCAAAAAGGCGCTTTCGCTGGCCGACGGGGATGCCGCAGCTGGTAGC
ACTATTGCTGGTGCTGCTGGTCGACAGCCTGGTAGCCCCGCATTTCTGGCAGGTAGTGCTTCAGGATGGGCGTTTGTTCG
GTAGCCCCATAGACATTCTTAACCGTGCAGCCCCCGTTGCGTTACTGGCGATTGGTATGACGCTGGTGATCGCCACCGGT
GGGATTGATCTCTCCGTAGGGGCGGTGATGGCTATCGCCGGAGCCACAACGGCTGCGATGACGGTCGCGGAAGTCAGCCT
GCCGATTGTTTTGTTAAGCGCCCTGGGCACCGGCATCCTGGCGGGATTGTGGAACGGCATACTGGTAGCGATCCTCAAAA
TTCAGCCATTTGTCGCCACCCTGATCCTGATGGTCGCCGGGCGCGGCGTGGCGCAACTGATCACCTCCGGACAGATCGTC
ACGTTTAACTCGCCGGATCTCTCATGGTTTGGCAGTGGATCGCTGTTGTTCCTGCCAACGGCAGTCATTATTGCGGTACT
GACGCTTCTCCTGTTCTGGCTGTTGACCCGCAAAACGGCACTGGGGATGTTTATCGAAGCCGTTGGTATCAACATTCGGG
CGGCAAAAAATGCCGGGGTAAACACGCGGATCATCGTCATGCTCACTTATGTGTTGAGCGGGCTGTGTGCGGCGATTGCG
GGCATTATCGTGGCGGCGGATATTCGCGGTGCCGATGCCAACAACGCCGGATTATGGCTGGAGCTGGACGCCATTCTCGC
GGTGGTGATTGGCGGCGGATCGCTGATGGGCGGGCGCTTTAACCTGCTGCTCTCGGTAGTGGGGGCGCTGATTATTCAGG
GGATGAACACCGGAATTTTGCTTTCGGGCTTTCCACCGGAGATGAACCAGGTGGTGAAAGCGGTGGTGGTGCTTTGCGTG
CTGATTGTCCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTACGTAGCCGTGATAAAACGTAA

Upstream 100 bases:

>100_bases
GTGATCATCATGCTCGATCGCAAACAGGTGGCGGAGATCCGGCTGGCAGAGCTTTCCGTTCCGGCTATCATGAACGCCAT
TGCGGCGTAAGGAGAACAGT

Downstream 100 bases:

>100_bases
TTTGCCACTGATGATCACCATCGGCGTCTTTGTGCTGGGCTATTTCTACTGCCTGACGCAGTTTCCCGGTTTTGCTTCCA
CAAGAGTGATCTGCAATATC

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MMPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATG
GIDLSVGAVMAIAGATTAAMTVAEVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIV
TFNSPDLSWFGSGSLLFLPTAVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSRDKT

Sequences:

>Translated_341_residues
MMPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATG
GIDLSVGAVMAIAGATTAAMTVAEVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIV
TFNSPDLSWFGSGSLLFLPTAVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSRDKT
>Mature_341_residues
MMPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATG
GIDLSVGAVMAIAGATTAAMTVAEVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIV
TFNSPDLSWFGSGSLLFLPTAVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCV
LIVQSQRFISLIKGVRSRDKT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=341, Percent_Identity=98.533724340176, Blast_Score=644, Evalue=0.0,
Organism=Escherichia coli, GI1790191, Length=326, Percent_Identity=37.4233128834356, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1788896, Length=336, Percent_Identity=34.2261904761905, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1790524, Length=244, Percent_Identity=32.3770491803279, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI145693152, Length=333, Percent_Identity=32.1321321321321, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1787793, Length=274, Percent_Identity=35.036496350365, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1789992, Length=330, Percent_Identity=30.3030303030303, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87082395, Length=251, Percent_Identity=35.0597609561753, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788471, Length=281, Percent_Identity=29.8932384341637, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787794, Length=274, Percent_Identity=27.3722627737226, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35674; Mature: 35674

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDIL
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAEVSLPIVLLSALGTGIL
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVTFNSPDLSWFGSGSLLFLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCHHHHHH
AVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGIL
HHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
LSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSRDKT
EECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDIL
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
NRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAEVSLPIVLLSALGTGIL
HHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVTFNSPDLSWFGSGSLLFLPT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCHHHHHH
AVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
GIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGIL
HHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
LSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSRDKT
EECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]