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The map label for this gene is ycbT [H]

Identifier: 187731105

GI number: 187731105

Start: 2166416

End: 2167486

Strand: Reverse

Name: ycbT [H]

Synonym: SbBS512_E2376

Alternate gene names: 187731105

Gene position: 2167486-2166416 (Counterclockwise)

Preceding gene: 187731051

Following gene: 187734022

Centisome position: 46.96

GC content: 48.27

Gene sequence:

>1071_bases
ATGCAGATAATCTTTGGAGAAAAATGCGTGTTATTACTACGACTATTTTTTGCCGCCGTCTTAATGCTATGGTGCGCTCA
AACTGCTGCTTATAGCGGGCAGTGTCATACCACTCAGGGGAATCCGTATATTGGCGTCAATTTTGGCGTTAAAACCCTGG
AGGAAGAAGAAAATACGGCTGGAGTAGTTAAAGACAAATTTTATCAGTGGAACGAATCGAATGATTATTATGTTTCCTGT
GATTGCGATAAAGACAATGTCAGAAGTGGCCGATGGGCATTCGCCGCGGATTCACCGTTAGTCTATTTAGGCGACAACTG
GTACAAAATTAATGACTATCTTGCCGCCAAAGTTTTATTGCAGGTTAAAGGCAGTTCTCCTACTGCGGTTCCTTTCGAAA
ACGTGGGCACAGGGGCAGATACACGATGGCATATTTGCGATCCCGGCGGTCAACGTTTAGGTGGCCAGGGGGCTAGCGGT
AATAGCGGTAGCTTTTCCCTGAAAATATTGCAGCCGTTCGTTGGTTCGGTCGTCATTCCTCCTATGGCGCTGGCGCGATT
ATTTGAATGCTACAACATACCCGCAGGTGATTCCTGCACGACTACAGGTACACCGGTTTTAGTGTATTACCTGTCTGGTA
CTATCAATTCACTTGGCTCATGTTCCGTCAATGCCGGAGAAACAATCGAGGTCGATCTGGGCGACGTATTTGCGGCTAAC
TTTCGTGTTGTAGGGCATAAGCCTCTTGGGGCCAGAACGGCAGAACTTGCAATTCCAGTCAGGTGTAACACGGGAAACGC
GGGGTTAGTTAACGTCAACCTGAGTCTGACGGCAACTACAGACCCCAGCTATCCCCAGGCGATTAAGACGTCACGTCCTG
GCGTGGGCGTGGTGGTGACCGATAGCCAGAACAACATTATTTCCCCTGCTGGTGGAACATTACCGCTCTCTATTCCTGAT
GATGCAGACAGTATCGCGCGAATGAATGTCTATCCAGTCAGCACGACAGGTGTACCACCAGAAACCGGGCGATTTGAAGC
CACGGCAACGGTGAGAATAAATTTTGATTAA

Upstream 100 bases:

>100_bases
TAACTGTACGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAGTTACCAGCTTACCGAACAACAAATTAACTCTGCG
ATTACGCGAATGGATGCCAT

Downstream 100 bases:

>100_bases
CGCGTGAACGTATGAAGAAAAAAACGATATTTCAGTGCGTTATCTTGTTCTTTAGCATTCTTAACATCCATGTCGGGATG
GCTGGGCCTGAACAAGTTAG

Product: putative fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEENTAGVVKDKFYQWNESNDYYVSC
DCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASG
NSGSFSLKILQPFVGSVVIPPMALARLFECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSIARMNVYPVSTTGVPPETGRFEATATVRINFD

Sequences:

>Translated_356_residues
MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEENTAGVVKDKFYQWNESNDYYVSC
DCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASG
NSGSFSLKILQPFVGSVVIPPMALARLFECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSIARMNVYPVSTTGVPPETGRFEATATVRINFD
>Mature_356_residues
MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEENTAGVVKDKFYQWNESNDYYVSC
DCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLLQVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASG
NSGSFSLKILQPFVGSVVIPPMALARLFECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVTDSQNNIISPAGGTLPLSIPD
DADSIARMNVYPVSTTGVPPETGRFEATATVRINFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787173, Length=356, Percent_Identity=98.876404494382, Blast_Score=724, Evalue=0.0,
Organism=Escherichia coli, GI145693100, Length=201, Percent_Identity=26.3681592039801, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37933; Mature: 37933

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEENTA
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCEEECCCCCCC
GVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLL
CEEEHHEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCEEEECHHEEEEEEE
QVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASGNSGSFSLKILQPFVGSVVIP
EECCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHCCEECC
PMALARLFECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEE
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVT
EEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCEEEEEE
DSQNNIISPAGGTLPLSIPDDADSIARMNVYPVSTTGVPPETGRFEATATVRINFD
CCCCCEECCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MQIIFGEKCVLLLRLFFAAVLMLWCAQTAAYSGQCHTTQGNPYIGVNFGVKTLEEEENTA
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCEEECCCCCCC
GVVKDKFYQWNESNDYYVSCDCDKDNVRSGRWAFAADSPLVYLGDNWYKINDYLAAKVLL
CEEEHHEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEECCCEEEECHHEEEEEEE
QVKGSSPTAVPFENVGTGADTRWHICDPGGQRLGGQGASGNSGSFSLKILQPFVGSVVIP
EECCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCHHCCEECC
PMALARLFECYNIPAGDSCTTTGTPVLVYYLSGTINSLGSCSVNAGETIEVDLGDVFAAN
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEEE
FRVVGHKPLGARTAELAIPVRCNTGNAGLVNVNLSLTATTDPSYPQAIKTSRPGVGVVVT
EEEEECCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEECCCCCCCHHHHCCCCCEEEEEE
DSQNNIISPAGGTLPLSIPDDADSIARMNVYPVSTTGVPPETGRFEATATVRINFD
CCCCCEECCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]