| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is puuA
Identifier: 187731037
GI number: 187731037
Start: 1400943
End: 1402361
Strand: Reverse
Name: puuA
Synonym: SbBS512_E1533
Alternate gene names: 187731037
Gene position: 1402361-1400943 (Counterclockwise)
Preceding gene: 187731147
Following gene: 187731252
Centisome position: 30.38
GC content: 53.42
Gene sequence:
>1419_bases ATGGAAACCAATATCGTTGAAGTAGAGAACTTTGTTCAGCAGCCAGAAGAGAGGCGGGGTAGCGCCTTTACGCAGGAAGT GAAACGCTACCTGGAGCGCTACCCGAATACGCAATATGTTGATGTTTTACTTACTGATTTGAATGGTTGCTTCCGTGGAA AACGTATCCCTGTTTCAAGCCTGAAGAAGTTGGAGAAAGGGTGTTATTTCCCGGCCTCGGTGTTTGCAATGGATATTCTG GGCAACGTAGTAGAAGAAGCGGGTCTGGGTCAGGAAATGGGCGAGCCGGATCGTACTTGTGTTCCTGTTCTCGGTTCCTT AACCCCTTCTGCCGCCGATCCAGAGTTTATCGGTCAGATGCTCCTGACCATGGTCGATGAAGATGGCGCTCCCTTTGACG TTGAGCCGCGGAACGTTCTTAACCGCCTGTGGCAGCAGCTACGCCAGCGCGGATTGTTCCCGGTTGTAGCGGTAGAGCTG GAGTTCTATTTACTGGATCGTCAGCGCGACGCTGAAGGGTATCTGCAACCGCCCTGCGCGCCCGGCACCGATGACCGCAA TACACACAGCCAGGTTTACTCCGTTGATAACCTCAACCACTTCGCCGACGTGCTCAATGATATTGATGAACTGGCGCAGT TACAGTTAATTCCCGCCGACGGTGCGGTCGCCGAAGCCTCGCCGGGTCAGTTTGAAATCAACCTTTACCATACCGATAAC GTGCTGGAAGCCTGCGATGATGCGCTGGCGCTAAAACTCCTGGTGCGTCTGATGGCAGAAAAGCATAAGATGCACGCCAC TTTTATGGCGAAGCCGTATGAAGAGCACGCGGGCAGCGGGATGCATATCCATATCAGTATGCAAAATAATCGTGGCGAGA ATGTGCTTTCTGACACAGAAGGCGAAGATTCGCCGCTGCTGAAAAAGATGCTCGCCGGGATGATTGACCTGATGCCGTCG TCGATGGCGTTGCTGGCACCAAACGTGAACTCGTATCGCCGCTTCCAGCCGGGAATGTATGTGCCGACGCAGGCGTCGTG GGGCCATAACAACCGCACCGTCGCCCTGCGTATTCCGTGCGGCGACCGTCATAATCACCGCGTGGAATATCGCGTGGCGG GTGCCGATGCCAACCCATATCTGGTGATGGCAGCGATTTTTGCCGGTATTTTGCATGGCCTTGATAACGAGCTGCCGTTG CAGGAAGAAGTCGAAGGCAACGGGCTGGAACAGGAAGGCTTACCCTTCCCGATTCGCCAGAGCGATGCCCTGGGTGAGTT TATCGAGAATGATCACCTGCGCCGCTATTTAGGCGAACGGTTTTGCCATGTGTATCACGCCTGTAAAAATGATGAGCTGT TGCAGTTTGAGCGCCTCATCACAGAAACAGAAATTGAGTGGATGTTGAAAAACGCATAG
Upstream 100 bases:
>100_bases TAACATTTGACAAACATTTAGTTTGCATGCAGATTCGAATGATGGTCATTATATTTTACGCTTTGATAACGAGCGGAAAA CAAACCAAAGGCGAAGAATC
Downstream 100 bases:
>100_bases TACCCCTTGCGGGGTTGTTTCATCAACCTGAGCGGAGCCAGGCCTGACATTTGCTGGTAATCCAGACATTTCCCGGATGT CGCGTTATGGAGCGCAGGCG
Product: glutamate--putrescine ligase
Products: NA
Alternate protein names: Gamma-Glu-Put synthetase; Glutamate--putrescine ligase [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDIL GNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL EFYLLDRQRDAEGYLQPPCAPGTDDRNTHSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN VLEACDDALALKLLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPS SMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPL QEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA
Sequences:
>Translated_472_residues METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDIL GNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL EFYLLDRQRDAEGYLQPPCAPGTDDRNTHSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN VLEACDDALALKLLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPS SMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPL QEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA >Mature_472_residues METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDIL GNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL EFYLLDRQRDAEGYLQPPCAPGTDDRNTHSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN VLEACDDALALKLLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPS SMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPL QEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA
Specific function: Involved in the breakdown of putrescine via the biosynthesis of gamma-L-glutamylputrescine [H]
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=435, Percent_Identity=25.0574712643678, Blast_Score=99, Evalue=6e-21, Organism=Escherichia coli, GI87081870, Length=472, Percent_Identity=99.1525423728814, Blast_Score=970, Evalue=0.0, Organism=Escherichia coli, GI1790301, Length=401, Percent_Identity=26.1845386533666, Blast_Score=93, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.11 [H]
Molecular weight: Translated: 53184; Mature: 53184
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSS CCCCHHHHHHHHHCCHHHHCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHH LKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQM HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH LLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCA HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC PGTDDRNTHSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN CCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEECCC VLEACDDALALKLLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCC GEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPC CCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECC GDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQ CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCC SDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSS CCCCHHHHHHHHHCCHHHHCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHH LKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQM HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH LLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCA HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC PGTDDRNTHSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN CCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEECCC VLEACDDALALKLLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCC GEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPC CCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECC GDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQ CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCC SDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]