| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is ade
Identifier: 187730988
GI number: 187730988
Start: 3976682
End: 3978391
Strand: Reverse
Name: ade
Synonym: SbBS512_E4254
Alternate gene names: 187730988
Gene position: 3978391-3976682 (Counterclockwise)
Preceding gene: 187730910
Following gene: 187733259
Centisome position: 86.19
GC content: 55.5
Gene sequence:
>1710_bases TTGTTAGCCGTTTCCCGTGGCGACGCTGTTGCCGATTATATTATTGATAATGTCTCTATTCTCGACCTGATCAATGGCGG AGAAATTTCCGGCCCAATTGTGATTAAAGGACGTTACATTGCCGGTGTTGGCGCAGAATACGCTGATGCTCCGGCTTTGC AGCGGATTGATGCTCGCGGCGCAACGGCGGTGCCAGGGTTTATTGATGCTCACCTGCATATTGAATCCAGCATGATGACG CCGGTCACCTTTGAAACCGCTACCCTGCCGCGCGGCCTGACGACCGTTATTTGCGACCCTCATGAAATCGTCAACGTGAT GGGAGAAGCCGGATTCGCCTGGTTTGCCCGCTGTGCCGAACAGGCAAGGCAAAACCAGTACTTACAGGTCAGCTCTTGCG TACCCGCCCTGGAAGGCTGCGATGTTAACGGTGCCAGTTTTACCCTTGAACAGATGCTCGCCTGGCGGGACCATCCGCAG GTTACCGGCCTTGCAGAAATGATGGACTACCCTGGCGTAATTAGCGGGCAGAATGCGCTGCTCGATAAACTGGATGCATT TCGCCACCTGACGCTGGACGGTCACTGCCCGGGTTTGGGTGGTAAAGAACTTAACGCCTATATTACTGCGGGTATTGAAA ACTGCCACGAAAGTTATCAGCTGGAAGAAGGACGCCGGAAATTACAACTCGGCATGTCGTTGATGATCCGCGAAGGGTCC GCTGCCCGCAATCTCAACGCGCTGGCACCGTTGATCAACGAATTTAACAGCCCGCAATGCATGCTCTGTACCGATGACCG TAACCCGTGGGAGATCGCCCATGAAGGACACATCGATGCCTTAATTCGCCGCCTGATCGAACAACACAATGTGCCGCTGC ATGTGGCATATCGCGTCGCCAGCTGGTCGACGGCGCGCCACTTTGGTCTGAATCACCTCGGCTTACTGGCACCCGGCAAG CAGGCCGATATCGTCCTGTTGAGCGATGCGCGTAAGGTCACGGTGCAGCAGGTACTGGTGAAAGGCGAGCCGATTGATGC GCAAACCTTACAGGCGGAAGAGTCGGCGAGACTGGCACAATCCGCTCCGCCATATGGCAACACCATTGCCCGCCAGCCAG TTTCCGCCAGCGACTTTGCCCTGCAATTTACGCCCGGAAAACGCTATCGGGTCATTGACGTCATCCATAACGAATTGATT ACGCACTCCCACTCCAGCGTCTACAGCGAAAATGGTTTTGATCGCGATGATGTGTGCTTTATTGCCGTACTTGAGCGTTA CGGGCAACGGCTGGCTCCGGCTTGTGGTTTGCTTGGCGGCTTTGGACTGAATGAAGGTGCGCTGGCTGCGACGGTCAGCC ATGACAGCCATAATATTGTGGTGATCGGTCGCAGTGCCGAAGAGATGGCGCTGGCGGTCTATCAGGTGATTCAGGATGGC GGCGGGCTGTGCGTGGTACGTAACGGCCAGGTCCAAAGTCATCTGCCGTTGCCCATTGCCGGCCTGATGAGCACCGACAC GGCGCAGTCGCTGGCGGAACAAATTGACGCCTTGAAAGCCGCCGCCCGTGAATGCGGTCCGTTACCCGATGAGCCGTTTA TTCAGATGGCGTTTCTTTCTCTGCCAGTGATCCCCGCGCTAAAACTAACCAGTCAGGGGCTATTTGATGGCGAGAAGTTT GCCTTCACTACGCTGGAAGTCACGGAATAA
Upstream 100 bases:
>100_bases TGATAAATAATAATCAAATTGATAAAATCAAAATGAGAAAAATCTGAATAATTCCATTAACCATAAATTTCATCACATTA GCCGGGCTGAATACCAGGAA
Downstream 100 bases:
>100_bases TAAAAAAGCCCGGCGTCATGCCGGGCAAAAGTCACCAGTTACGTTTATGCCACTGTCAACTGCTGAATTTTTTTCTCGCG GCGGATTTTGCGTTCTTCCA
Product: cryptic adenine deaminase
Products: NA
Alternate protein names: Adenase; Adenine aminase [H]
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMT PVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQ VTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGS AARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGK QADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIHNELI THSHSSVYSENGFDRDDVCFIAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVYQVIQDG GGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLFDGEKF AFTTLEVTE
Sequences:
>Translated_569_residues MLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMT PVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQ VTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGS AARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGK QADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIHNELI THSHSSVYSENGFDRDDVCFIAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVYQVIQDG GGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLFDGEKF AFTTLEVTE >Mature_569_residues MLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMT PVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQ VTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGS AARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLGLLAPGK QADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIHNELI THSHSSVYSENGFDRDDVCFIAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVYQVIQDG GGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSLPVIPALKLTSQGLFDGEKF AFTTLEVTE
Specific function: Unknown
COG id: COG1001
COG function: function code F; Adenine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenine deaminase family [H]
Homologues:
Organism=Escherichia coli, GI1790098, Length=569, Percent_Identity=99.2970123022847, Blast_Score=1163, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006679 - InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.2 [H]
Molecular weight: Translated: 61456; Mature: 61456
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARG CCEECCCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCC ATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAE CCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHHH QARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNAL HHHCCCCEEEHHCCCHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCHHH LDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGS HHHHHHHHEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEECCC AARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVA CCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEEE SWSTARHFGLNHLGLLAPGKQADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQ CCCHHHHCCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHH SAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIHNELITHSHSSVYSENGFDRDDVCF CCCCCCCCHHCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCCHHHCCCCCCCCCHHH IAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVYQVIQDG HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHCC GGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLS CCEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LPVIPALKLTSQGLFDGEKFAFTTLEVTE CCCCHHHHHCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MLAVSRGDAVADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARG CCEECCCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHCCCC ATAVPGFIDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAE CCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHHHH QARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNAL HHHCCCCEEEHHCCCHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCHHH LDKLDAFRHLTLDGHCPGLGGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGS HHHHHHHHEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEECCC AARNLNALAPLINEFNSPQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVA CCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEEE SWSTARHFGLNHLGLLAPGKQADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQ CCCHHHHCCCCCCEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHCCHHHHHHHH SAPPYGNTIARQPVSASDFALQFTPGKRYRVIDVIHNELITHSHSSVYSENGFDRDDVCF CCCCCCCCHHCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCCHHHCCCCCCCCCHHH IAVLERYGQRLAPACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVYQVIQDG HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHCC GGLCVVRNGQVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLS CCEEEEECCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LPVIPALKLTSQGLFDGEKFAFTTLEVTE CCCCHHHHHCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA