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The map label for this gene is ygbN [H]

Identifier: 187730865

GI number: 187730865

Start: 2925761

End: 2927125

Strand: Reverse

Name: ygbN [H]

Synonym: SbBS512_E3134

Alternate gene names: 187730865

Gene position: 2927125-2925761 (Counterclockwise)

Preceding gene: 187731495

Following gene: 187733994

Centisome position: 63.41

GC content: 51.28

Gene sequence:

>1365_bases
ATGTCCACAATTACATTGTTATACATTGCGTTAGCTGGCGTAATCATGCTGTTGCTGCTGGTCATCAAGGCAAAGGTACA
ACCATTCGTTGCTCTGCTCCTCGTCAGCCTGTTAGTCGCACTTGCGGCGGGTATACCGGCGGGCGAAGTGGGTAAAGTGA
TGATCGCCGGGATGGGCGGTGTGCTTGGTTCCGTCACTATTATTATTGGTCTGGGCGCTATGCTGGGGCGTATGATCGAA
CACTCTGGTGGTGCAGAGTCACTGGCTAATTATTTCAGTCGCAAGTTAGGTGACAAACGAACTATCGCTGCGCTGACTCT
GGCAGCGTTCTTCCTCGGTATTCCCGTCTTCTTTGATGTCAGCTTTATTATTCTTGCGCCAATCATTTACGGTTTTGCCA
AGGTTGCCAAAATATCGCCACTCAAATTTGGCCTGCCTGTCGCTGGAATCATGCTAACTGTTCATGTGGCAGTACCGCCG
CATCCAGGCCCTGTCGCCACAGCGGGGTTACTCCACGCAGACATCGGCTGGCTAACCATCATCGGTATTGCGATTTCTAT
TCCCGTAGGGATTGTTGGCTACTTTGCAGCGAAAATAATCAATAAGCGCCAATATGCGATGTCAGTAGAAGTACTGGAAC
AGATGCAACTGGCTCCGGCCAGTGAGGAAGGCGCGACAAAATTAAGCGATAAAATAAATCCACCGGGCGTCGCGCTGGTC
ACCTCGCTAATTGTTATTCCTATCGCGATTATCATGACGGGTACGGTTTCCGCAACACTGATGCCGCCTTCGCATCCCCT
GCTTGGTACGCTACAGCTGATCGGCTCACCAATGGTAGCTCTAATGATTGCGCTGGTGCTGGCATTCTGGTTATTGGCTT
TACGTCGCGGCTGGAGCTTACAACACACCAGCGACATTATGGGCTCAGCCCTTCCCACTGCGGCGGTAGTGATTTTGGTT
ACTGGTGCTGGAGGGGTATTTGGCAAAGTGCTGGTGGAATCGGGCGTCGGCAAAGCCCTTGCCAATATGCTACAAATGAT
TGACCTGCCTCTGTTACCAGCCGCATTTATTATTTCACTGGCTCTGCGTGCATCGCAGGGGTCAGCAACCGTAGCAATCC
TGACAACCGGCGGGTTACTCTCAGAAGCGGTGATGGGATTGAATCCGATTCAGTGCGTATTGGTGACGCTGGCAGCCTGC
TTTGGTGGGCTTGGCGCGTCACATATTAATGACTCAGGGTTCTGGATTGTGACCAAATATCTGGGGTTGTCGGTAGCAGA
CGGTCTGAAAACCTGGACAGTGTTAACGACCATTCTCGGTTTTACCGGATTCTTAATTACCTGGTGCGTATGGGCGGTAA
TTTGA

Upstream 100 bases:

>100_bases
GCCTGGCGCTAATTCGTTAAATCCCTAATTACAACGTACCCATACATCCCCCCATCTACGGATGGGGTAGGTTAACTATA
ACTTTCAGACAGGGTTTCCC

Downstream 100 bases:

>100_bases
CCTTAATAAAAAGGTCCGATGGGCATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCT
GACAGATGCTTACTTACTCG

Product: inner membrane permease YgbN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSTITLLYIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIE
HSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDVSFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
HPGPVATAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALV
TSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILV
TGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAAC
FGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI

Sequences:

>Translated_454_residues
MSTITLLYIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIE
HSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDVSFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
HPGPVATAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALV
TSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILV
TGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAAC
FGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI
>Mature_453_residues
STITLLYIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEH
SGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDVSFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPH
PGPVATAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALVT
SLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVT
GAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACF
GGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1789097, Length=454, Percent_Identity=98.8986784140969, Blast_Score=865, Evalue=0.0,
Organism=Escherichia coli, GI48994935, Length=440, Percent_Identity=34.5454545454545, Blast_Score=228, Evalue=8e-61,
Organism=Escherichia coli, GI48994939, Length=453, Percent_Identity=32.6710816777042, Blast_Score=226, Evalue=3e-60,
Organism=Escherichia coli, GI1790716, Length=440, Percent_Identity=32.9545454545455, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1790776, Length=454, Percent_Identity=30.6167400881057, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI2367370, Length=451, Percent_Identity=33.2594235033259, Blast_Score=191, Evalue=7e-50,
Organism=Escherichia coli, GI1788707, Length=434, Percent_Identity=29.0322580645161, Blast_Score=171, Evalue=8e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 46935; Mature: 46803

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTITLLYIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCH
VLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVATAGLLHADIGWLTI
HHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
IGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHH
TSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSL
HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
QHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISL
CHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH
ALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACFGGLGASHINDSGFWIVTKY
HHHCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHH
LGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
STITLLYIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCH
VLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVATAGLLHADIGWLTI
HHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
IGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHH
TSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSL
HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
QHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISL
CHHHHHHHHHCCHHEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH
ALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACFGGLGASHINDSGFWIVTKY
HHHCCCCCEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHH
LGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]