Definition Shigella boydii CDC 3083-94 chromosome, complete genome.
Accession NC_010658
Length 4,615,997

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The map label for this gene is yhgE [H]

Identifier: 187730672

GI number: 187730672

Start: 3505050

End: 3506774

Strand: Reverse

Name: yhgE [H]

Synonym: SbBS512_E3780

Alternate gene names: 187730672

Gene position: 3506774-3505050 (Counterclockwise)

Preceding gene: 187734214

Following gene: 187733633

Centisome position: 75.97

GC content: 49.86

Gene sequence:

>1725_bases
ATGGATAACGTTGAACTTTCACCGGCAACACGCTGGGGGATGATTGCTACCGGATTACTTCAGGGGCTGGTTTGCTACCT
GTTGATCGCCTGGCTTGCCGGAAAAAATCACAGTTGGATTGTTTATGGCGTGCCTGCGACCGTTGCGTTTTCATCCGTTT
TACTCTTCTCCGTGATCTCTTTTAAACAGAAGCGCCTTTGGGGATGGCTGGCGCTGGTGTTTATTGCCACGACAGGGATG
AGCGGTTGGCTGAAGTGGCAAACTGATGGCATGAACCCCTGGAGAGCTGAAAAGGCGATTTGGGATTTTGGCTGCTATCT
GCTGTTGATGGCAATGTTGTTGCTACCGTGGATACAACAAAGCCTTCGTATCCGCAATGGCAGTAGCCGCTATAGCTACT
TTTACCAGTCAGTATGGCATAACGTACTTATATTACTGGTGATTTTTCTCGCCAATGGCCTGACGTGGCTGGTGCTTTTA
CTGTGGGGTGAGTTGTTTAAACTTGTTGGCATCAAGTTTTTCAATACGCTCTTTTTTGCAACCGACTGGTTTATGTATCT
TACATTAGGTCTGGTTACCGCACTGGCGGTGATTCTCGCGCGCACACAGTCACGTTTAATCGACTCTATTCAAAAGTTGT
TCACGTTAATCGCCACGGGGTTGCTGCCGTTAGTATCATTGCTAACCCTGATGTTTATCATCACTCTGCCGTTTACGGGC
CTGAGCGCGATTTCTCGCCACATCTCCGCCGCCGGGTTGCTGTTAACGCTGGCCTTTTTGCAATTGATCTTAATGGCTAT
TGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACGGGGCCGTTGCGTTGCCTGATTAAAACCGCTTTGCTGGTTGCTC
CGCTGTATGTGTTCGTTGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGC
GCGCTGGCGGTGCTGGTGTTACTGGTGTGGTCGCTGGGGTATTTTGTCAGTATCGTCTGGCGTAATGGGCAAAATCCCCT
TGTTCTTCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTGATACTGGTGCTTCTTAATTCGCCGGTGCTGG
ACAGTATGCGTATTAGCGTGAACAGTCATATGGCGCGTTATCAGAGCGGCAAAAACACGCCAGACCAGGTAACTATCTAC
ATGCTCGAACAGAGCGGTCGCTATGGACGTGCGGCGCTTGAGTCGCTGAAAAGCGATGCCGGGTTTATGAAAGACCCGAA
ACGCTCGCGGGATCTGCTGATGGCGTTAGATGGAGAGCAACATCTTCAGGAACAGGTATCGGAAAAAGTATTAGCCGAAA
ATGTGTTAATTGCCCCTGGTTCTGTTAAACCGGATGCGACATTCTGGTCGGCCTTAATCCAGGATCGCTATAACGTGATG
ACCTGTATTGAAAAAGACGCCTGCGTCCTGGTCGAGCAAGATCTGAATAGTGATGGTCAGGCGGAGCGGATCCTGTTTGC
TTTTAATGATGACAGAGTCATTGTCTATGGCTTTGACTCAGACAGAAAAGAATGGGACGCGCTTGATATGAGTTTACTTC
CGAACGAAATAACGAAAGAAAAATTACTCACAGCTGCGAAGGATGGAAAACTGGGGACGAGGCCGAAAGCGTGGCGCGAT
CTGACGGTAGATGGTGAAACGCTGGAAATAAACTTAAGTAAGTGA

Upstream 100 bases:

>100_bases
GATTCACCACGCTAACTTTTTTTGATTATTTTCTGAAAAAAGCAAAATACTACTGCCCGGATGCGATAATTAACCCACCT
TTTGATTCTGGATAACCAAC

Downstream 100 bases:

>100_bases
CAACGCTTTTATCGGATACGACGCTGTATCTGACCAAAATAATTTGCGATTTATTTCATAGGCGCTGGTAAGCGCAGCAC
ATCAGGCCATTAAGTTGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGM
SGWLKWQTDGMNPWRAEKAIWDFGCYLLLMAMLLLPWIQQSLRIRNGSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLL
LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG
LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQG
ALAVLVLLVWSLGYFVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY
MLEQSGRYGRAALESLKSDAGFMKDPKRSRDLLMALDGEQHLQEQVSEKVLAENVLIAPGSVKPDATFWSALIQDRYNVM
TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRD
LTVDGETLEINLSK

Sequences:

>Translated_574_residues
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGM
SGWLKWQTDGMNPWRAEKAIWDFGCYLLLMAMLLLPWIQQSLRIRNGSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLL
LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG
LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQG
ALAVLVLLVWSLGYFVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY
MLEQSGRYGRAALESLKSDAGFMKDPKRSRDLLMALDGEQHLQEQVSEKVLAENVLIAPGSVKPDATFWSALIQDRYNVM
TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRD
LTVDGETLEINLSK
>Mature_574_residues
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGM
SGWLKWQTDGMNPWRAEKAIWDFGCYLLLMAMLLLPWIQQSLRIRNGSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLL
LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG
LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQG
ALAVLVLLVWSLGYFVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY
MLEQSGRYGRAALESLKSDAGFMKDPKRSRDLLMALDGEQHLQEQVSEKVLAENVLIAPGSVKPDATFWSALIQDRYNVM
TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRD
LTVDGETLEINLSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yrdB [H]

Homologues:

Organism=Escherichia coli, GI1789805, Length=574, Percent_Identity=96.1672473867596, Blast_Score=1011, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64487; Mature: 64487

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVIS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH
FKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWDFGCYLLLMAMLLLPWIQQ
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRIRNGSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLLLWGELFKLVGIKFFNTLFFA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGYFVSIVWRNGQNPLVLQGKVNLAVSLL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCHHHHHHHH
VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEQSGRYGRAALESLKSDA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
GFMKDPKRSRDLLMALDGEQHLQEQVSEKVLAENVLIAPGSVKPDATFWSALIQDRYNVM
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHH
TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKE
HHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCHHHHH
KLLTAAKDGKLGTRPKAWRDLTVDGETLEINLSK
HHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECC
>Mature Secondary Structure
MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGVPATVAFSSVLLFSVIS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH
FKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWDFGCYLLLMAMLLLPWIQQ
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRIRNGSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLLLWGELFKLVGIKFFNTLFFA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLVAPLYVFVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGYFVSIVWRNGQNPLVLQGKVNLAVSLL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCHHHHHHHH
VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEQSGRYGRAALESLKSDA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC
GFMKDPKRSRDLLMALDGEQHLQEQVSEKVLAENVLIAPGSVKPDATFWSALIQDRYNVM
CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHH
TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPNEITKE
HHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCHHHHH
KLLTAAKDGKLGTRPKAWRDLTVDGETLEINLSK
HHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]