Click here to switch to the map view.

The map label for this gene is yaiW [H]

Identifier: 187730643

GI number: 187730643

Start: 290036

End: 291130

Strand: Direct

Name: yaiW [H]

Synonym: SbBS512_E0295

Alternate gene names: 187730643

Gene position: 290036-291130 (Clockwise)

Preceding gene: 187731239

Following gene: 187731940

Centisome position: 6.28

GC content: 53.24

Gene sequence:

>1095_bases
ATGTCGCGCGTCAATCATCTATCTTCGCTGTCATTGTTGGCGGTTCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCA
ACCGTTGAAAAAGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCG
ATGCCTGGGCGAAATATCTCGCCACCACCTTTGAAAGTCAGGGGCTGGCACCGACGCTGGAAAACGTCTGCTCGGTGCTG
GCGGTGGCGCAGCAGGAGTCAAATTATCAGGCAGATCCGGCCGTTCCGGGCTTAAGCAAGATCGCCTGGCAAGAGATTGA
CCGTCGTGCTGAACGGATGCACATTCCTGCTTTTCTGGTTCATACCGCGCTAAAAATCAAATCGCCAAACGGCAAAAGTT
ATAGCGAACGGTTAGATTCGGTGCGTACAGAAAAGCAATTGAGCGCGATTTTTGACGATCTGATCAGCATGGTACCAATG
GGGCAGACGCTGTTTGTTTCGCTTAATCCGGTGCGCACCGGTGGGCCGATGCAGGTCAGCATTGCTTTTGCCGAACAGCA
TACCAAAGGGTATCCGTGGAAAATGGACGGTACAGTTCGTCAGGAAGTCTTCAGTCGCCGCGGCGGGTTGTGGTTTGGTA
CTTACCATTTACTGAATTATCCCGCCAGCTATAGCGCACCGATATACCGCTTTGCTGATTTTAACGCTGGCTGGTACGCC
AGCCGTAATGCCGCGTTTCAGAACGCGGTCAGTAAGGCCAGCGGCGTGAAGCTGGCACTGGACGGTGATTTAATTCGTTA
CGACAGTAAAGAACCCGGGAAAACCGAACTGGCAACGCGCAAACTGGCGGGAAAACTGGGGATGAGCGACAGCGAAATTC
GCCGTCAGTTAGAGAAAGGTGACAGCTTCTCTTTTGAGGAGACGGCGCTGTACAAGAAAGTTTATCAACTTGCCGAAGCG
AAAACGGGTAAATCACTACCCCGCGAAATGTTGCCTGGCATTCAACTGGAAAGCCCGAAAATCACCCGCAACCTGACTAC
GGCCTGGTTTGCGAAGCGCGTAGACGAACGGCGGGCGCGTTGTATGAAACAGTGA

Upstream 100 bases:

>100_bases
GTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCT
TGAGCTAAAAAGGAGAAGTA

Downstream 100 bases:

>100_bases
TCAAACAGGAATGTCATGCCAGATAAGGCGTTTTAGGCCGTATCTGGCAACGTAAATCTTACTGGCGGCGATGTCGCCAG
TGCAGCCATAGCGCCACCAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKYLATTFESQGLAPTLENVCSVL
AVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
GQTLFVSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA
SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEA
KTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRARCMKQ

Sequences:

>Translated_364_residues
MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKYLATTFESQGLAPTLENVCSVL
AVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
GQTLFVSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA
SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEA
KTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRARCMKQ
>Mature_363_residues
SRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKYLATTFESQGLAPTLENVCSVLA
VAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMG
QTLFVSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYAS
RNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAK
TGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRARCMKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786576, Length=364, Percent_Identity=98.3516483516484, Blast_Score=738, Evalue=0.0,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011673
- ProDom:   PD041438 [H]

Pfam domain/function: PF07759 DUF1615 [H]

EC number: NA

Molecular weight: Translated: 40474; Mature: 40343

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKYL
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLV
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
HTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMGQTLFVSLNPVRTGGPMQVS
HHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEE
IAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA
EEEEHHHCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCCCC
SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKG
CCHHHHHHHHHHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
DSFSFEETALYKKVYQLAEAKTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRAR
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
CMKQ
HCCC
>Mature Secondary Structure 
SRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQKMPASVKDRDAWAKYL
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIAWQEIDRRAERMHIPAFLV
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
HTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPMGQTLFVSLNPVRTGGPMQVS
HHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEE
IAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLLNYPASYSAPIYRFADFNAGWYA
EEEEHHHCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCCCC
SRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTELATRKLAGKLGMSDSEIRRQLEKG
CCHHHHHHHHHHHCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
DSFSFEETALYKKVYQLAEAKTGKSLPREMLPGIQLESPKITRNLTTAWFAKRVDERRAR
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
CMKQ
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]