| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is yniA
Identifier: 187730525
GI number: 187730525
Start: 1800302
End: 1801162
Strand: Direct
Name: yniA
Synonym: SbBS512_E1970
Alternate gene names: 187730525
Gene position: 1800302-1801162 (Clockwise)
Preceding gene: 187733790
Following gene: 187731237
Centisome position: 39.0
GC content: 52.15
Gene sequence:
>861_bases ATGTGGCAGGCAATCAGTCGTCTTTTGAGCGAGCAGTTAGGTGAAGGCGAAATCGAACTGCGTAATGAACTGCCTGGCGG AGAAGTCCATGCCGCATGGCATTTGCGCTATGCAGGACATGACTTTTTCGTCAAATGTGATGAAAGGGAACTGCTTCCCG GTTTTACCGCCGAAGCCGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTAGGC GCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGG TCAGCAAATTGCGCGTTTACATCAATGGAGTGACCAACCACAATTTGGCCTCGATTTTGATAACTCGCTCTCCACAACTC CACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCAGCA GAGAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCGCATCAACCGCAGCC TTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCGCTGGGTCCGGATGGCCCGTACATTTTCGACCCTGCCTGCT ACTGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATGACGGCTATCAG TCAGTATCCCCGCTACCTGCCGATTTCCTTGAACGTCAACCGGTTTACCAACTCTACACGCTGTTAAATCGTGCAAGGTT ATTTGGCGGTCAGCATTTGGTTATTGCTCAGCAGTCACTGGATAGATTATTAGCAGCATGA
Upstream 100 bases:
>100_bases TTTTGGGCAATAATCAGTCTGTGGTGTGCGTTAGCTCGTGTTTTTACACCGCATTCTTGCGCTAACCTTATGATCTGGCA GACAACATGGGAGAGACATC
Downstream 100 bases:
>100_bases TATGGGTTGAAGATAATGGCCGCTCTGTGCGGCCTTTTGATTAAATAAACCCAAGCAGAGAAAAGAACACATAACCTGCA GCAATACAAATAACCGGCAG
Product: fructosamine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVG ADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
Sequences:
>Translated_286_residues MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVG ADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA >Mature_286_residues MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVG ADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQ SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family
Homologues:
Organism=Homo sapiens, GI20149680, Length=294, Percent_Identity=28.9115646258503, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI11545906, Length=272, Percent_Identity=29.7794117647059, Blast_Score=99, Evalue=5e-21, Organism=Escherichia coli, GI1788019, Length=286, Percent_Identity=99.6503496503496, Blast_Score=586, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YNIA_ECO57 (P58065)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: C85781 - PIR: G90932 - RefSeq: NP_288158.1 - RefSeq: NP_310458.1 - ProteinModelPortal: P58065 - SMR: P58065 - EnsemblBacteria: EBESCT00000026765 - EnsemblBacteria: EBESCT00000058303 - GeneID: 913778 - GeneID: 961695 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z2754 - KEGG: ecs:ECs2431 - GeneTree: EBGT00050000011724 - HOGENOM: HBG635091 - OMA: LYNLYHI - ProtClustDB: CLSK880174 - BioCyc: ECOL83334:ECS2431-MONOMER - InterPro: IPR016477 - InterPro: IPR011009 - PIRSF: PIRSF006221
Pfam domain/function: PF03881 Fructosamin_kin; SSF56112 Kinase_like
EC number: NA
Molecular weight: Translated: 32475; Mature: 32475
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEAD CHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCHH QLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQP HHHHHHCCCEEECCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC QFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHCCCCCCCHHHHHHHHHHHH ASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQ HHCCCCCCEEECCCCCCCCCCCCCCCEEECCHHCCCCCCCCEEEECCCCCCCCHHHCCHH SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA HCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCC >Mature Secondary Structure MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFVKCDERELLPGFTAEAD CHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCHH QLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHSAFILGQQIARLHQWSDQP HHHHHHCCCEEECCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC QFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAAEKGIAFGNIDAIVEHIQQRL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHCCCCCCCHHHHHHHHHHHH ASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDRECDLAMLPLHTEQPPQIYDGYQ HHCCCCCCEEECCCCCCCCCCCCCCCEEECCHHCCCCCCCCEEEECCCCCCCCHHHCCHH SVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIAQQSLDRLLAA HCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796