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The map label for this gene is yfdF [H]

Identifier: 187730427

GI number: 187730427

Start: 2529611

End: 2530024

Strand: Direct

Name: yfdF [H]

Synonym: SbBS512_E2728

Alternate gene names: 187730427

Gene position: 2529611-2530024 (Clockwise)

Preceding gene: 187730459

Following gene: 187730549

Centisome position: 54.8

GC content: 38.65

Gene sequence:

>414_bases
TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG
TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA
GTTGGCAGCATTACCGTCGAGCAATAAGATATAATTTTCAAGTGGACGATGCAAAATTTAGACGCGATAATGTAAAAGAA
ATAATTTCTACTTTATTCGCTAACAAAGTTGACGTTGACCATCCTGAAAATAAATACAAAGACTTTAAGGATCTCGAAGA
TAAAGTTGAAAAAAGGCTTCAAAATCGCCAGACGGAATATCAAAATGAAATTAATCAACTATCTGCGCCAGATGTTAATT
TTGATGATATTTAA

Upstream 100 bases:

>100_bases
CCATAATGCGTGCACTGGCGCGACATCCGACGCCATTCATGGCCATATCAATGATTTTCTGGTGCGTACCGGGCTGAGAG
GCGGTGTAAGTGAACTGTAG

Downstream 100 bases:

>100_bases
AATTATTTTTCCAGTTTTTTGATTTTTCAACGCCTGAATATCGGAAATAGTCAGTGACGAACATCAGTATTTTTACATCA
TTACGTCCGGGTCATTGTCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRRAIRYNFQVDDAKFRRDNVKE
IISTLFANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEYQNEINQLSAPDVNFDDI

Sequences:

>Translated_137_residues
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRRAIRYNFQVDDAKFRRDNVKE
IISTLFANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEYQNEINQLSAPDVNFDDI
>Mature_136_residues
PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRRAIRYNFQVDDAKFRRDNVKEI
ISTLFANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEYQNEINQLSAPDVNFDDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788687, Length=121, Percent_Identity=52.0661157024793, Blast_Score=119, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15665; Mature: 15534

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRR
CCCHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHH
AIRYNFQVDDAKFRRDNVKEIISTLFANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEY
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QNEINQLSAPDVNFDDI
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYRR
CCHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHH
AIRYNFQVDDAKFRRDNVKEIISTLFANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEY
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QNEINQLSAPDVNFDDI
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]