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The map label for this gene is ydgJ [H]

Identifier: 187730396

GI number: 187730396

Start: 1659898

End: 1660977

Strand: Reverse

Name: ydgJ [H]

Synonym: SbBS512_E1812

Alternate gene names: 187730396

Gene position: 1660977-1659898 (Counterclockwise)

Preceding gene: 187730246

Following gene: 187731477

Centisome position: 35.98

GC content: 52.78

Gene sequence:

>1080_bases
GTGTCAAATAGCAATCATACTTCAATGAGAGGCAATGACATGAGCGACAACATCCGTGTTGGGTTGATTGGGTATGGTTA
TGCGAGCAAAACCTTCCATGCGCCCCTGATTGCGGGCACGCCCGGGCTGGAACTGGCGGTAATCTCCAGCAGTGATGAAA
CAAAAGTAAAAGCCGACTGGCCAACGGTTACGGTTGTCTCTGAGCCGAAGCATCTGTTTAACGATCCCAACATAGACCTG
ATTGTCATTCCTACACCCAACGATACCCATTTCCCGTTAGCCAAAGCGGCGCTTGAGGCGGGTAAACATGTGGTCGTTGA
TAAACCCTTTACCGTGACACTGTCACAAGCGCGAGAGCTGGATGCGCTGGCAAAAAGCCTGGGGCGTGTGCTGTCTGTAT
TCCATAACCGTCGTTGGGATAGCGATTTCTTGAAGCTAAAAGGTTTGCTCGCGGAAGGCGTGCTGGGTGAAGTTGCTTAC
TTTGAGTCTCATTTTGACCGCTTCCGTCCGCAGGTGCGCGATCGTTGGCGTGAACAGGGCGGCCCAGGCAGCGGTATCTG
GTACGATTTAGCACCGCATCTTCTTGATCAGGCCATTACGCTATTTGGTTTACCGGTCAGCATGACGGTAGATTTGGCAC
AGTTACGGCCCGGAGCGCAGTCGACCGATTATTTCCACGCCATCTTGTCCTATCCACAGCGGCGAGTCATTTTACACGGT
ACCATGCTGGCAGCCGCTGAGTCAGCACGGTATATCGTGCATGGATCCCGAGGCAGTTATGTGAAATATGGCCTCGATCC
ACAGGAAGAACGTCTGAAAAATGGCGAGCGTCTGCCGCAGGAAGACTGGGGCTACGATATGCGTGATGGCGTACTTACCC
GCGTGGAAGGTGAGGAACGTGTCGAAGAAACGCTGTTGACGGTACCTGGGAATTATCCGGCTTACTATGCGGCTATTCGT
GATGCGTTAAATGGCGATGGTGAAAATCCGGTTCCGGCAAGCCAGGCAATCCAGGTAATGGAGTTGATTGAGCTGGGCAT
CGAATCCGCCAAACATCGCGCGACTTTGTGCCTTGCATGA

Upstream 100 bases:

>100_bases
AGCTTTTGTCGTTGGAAAATTCGCTATTTTTTTGACTTAAGTTAAACAACATCCCTTATTGCTGGCAGGTTATTAAACTG
TTGAGCGTGGGTAAAGGATA

Downstream 100 bases:

>100_bases
AAAATGGATGGTGCAATTTGCACCATCCATTTTGTTACTTCGCGGCGACTTTTTCTCGCAGTGCGCGTTTTTCCTCAGCG
CTGAGGAAAGCCATTTCCAG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSNSNHTSMRGNDMSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVKADWPTVTVVSEPKHLFNDPNIDL
IVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLKLKGLLAEGVLGEVAY
FESHFDRFRPQVRDRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHG
TMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYPAYYAAIR
DALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA

Sequences:

>Translated_359_residues
MSNSNHTSMRGNDMSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVKADWPTVTVVSEPKHLFNDPNIDL
IVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLKLKGLLAEGVLGEVAY
FESHFDRFRPQVRDRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHG
TMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYPAYYAAIR
DALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA
>Mature_358_residues
SNSNHTSMRGNDMSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVKADWPTVTVVSEPKHLFNDPNIDLI
VIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALAKSLGRVLSVFHNRRWDSDFLKLKGLLAEGVLGEVAYF
ESHFDRFRPQVRDRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGT
MLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEERVEETLLTVPGNYPAYYAAIRD
ALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=346, Percent_Identity=99.4219653179191, Blast_Score=706, Evalue=0.0,
Organism=Escherichia coli, GI1789848, Length=346, Percent_Identity=35.8381502890173, Blast_Score=197, Evalue=9e-52,
Organism=Escherichia coli, GI1787574, Length=217, Percent_Identity=27.6497695852535, Blast_Score=86, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6323975, Length=256, Percent_Identity=25.390625, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39702; Mature: 39571

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSNHTSMRGNDMSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVKADW
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCEEEEEECCCCCEEEECC
PTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQAREL
CEEEEEECCHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEECCCCEEEHHHHHHH
DALAKSLGRVLSVFHNRRWDSDFLKLKGLLAEGVLGEVAYFESHFDRFRPQVRDRWREQG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
GPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHG
CCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEHHHCCCCCCCHHHHHHHHHCCCCEEEEEH
TMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEER
HHHHHHCCCEEEEECCCCCEEEECCCCHHHHHCCCCCCCHHHCCCCCCCCEEEECCCHHH
VEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA
HHHHEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
SNSNHTSMRGNDMSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVKADW
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCEEEEEECCCCCEEEECC
PTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQAREL
CEEEEEECCHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEECCCCEEEHHHHHHH
DALAKSLGRVLSVFHNRRWDSDFLKLKGLLAEGVLGEVAYFESHFDRFRPQVRDRWREQG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC
GPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHG
CCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEHHHCCCCCCCHHHHHHHHHCCCCEEEEEH
TMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTRVEGEER
HHHHHHCCCEEEEECCCCCEEEECCCCHHHHHCCCCCCCHHHCCCCCCCCEEEECCCHHH
VEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGIESAKHRATLCLA
HHHHEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]