| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is 187730377
Identifier: 187730377
GI number: 187730377
Start: 4051142
End: 4051384
Strand: Reverse
Name: 187730377
Synonym: SbBS512_E4336
Alternate gene names: NA
Gene position: 4051384-4051142 (Counterclockwise)
Preceding gene: 187734089
Following gene: 187731070
Centisome position: 87.77
GC content: 33.74
Gene sequence:
>243_bases ATGTCCGTGCCTGTTTATCAGATTATGGGTAAAGGATGCCACAGACAGGATAAAAACATGAGTTTTTCACCGCTTTTCGT GAAAATCTTTTGTAGATCTTCTGGATCGCTCGCAAATCGTCATGTGGATAACTTTGTGCATAAATTATTTACATCGCTTT TAATTTATTATCATGCTTTTTACAGCATGATGTTTGTCTTTGTTTTTCATGTAGTTAAAAATAAAGCCATCCCTAATAAT TGA
Upstream 100 bases:
>100_bases GCCTGCGCTGTTAGTCAGCGGGGGAAACGCGTGATATGCGCGATAAAGATAAGATGAACCATCTACAAGGATAAGTGGAT TTTGGGGGATCTGAACCATA
Downstream 100 bases:
>100_bases GATAATGGGATTTTTTCTAATGTGGATAGATATGAATTATTTTTCTCCTTAAGGATCATCCGTTATTTGGGTCGTTTTCT GCTAAAATCTGCGCCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDNFVHKLFTSLLIYYHAFYSMMFVFVFHVVKNKAIPNN
Sequences:
>Translated_80_residues MSVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDNFVHKLFTSLLIYYHAFYSMMFVFVFHVVKNKAIPNN >Mature_79_residues SVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDNFVHKLFTSLLIYYHAFYSMMFVFVFHVVKNKAIPNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9336; Mature: 9205
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDNFVHKLFTSLLIYYHAF CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YSMMFVFVFHVVKNKAIPNN HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDNFVHKLFTSLLIYYHAF CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YSMMFVFVFHVVKNKAIPNN HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA