| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
Click here to switch to the map view.
The map label for this gene is yfeY
Identifier: 187730312
GI number: 187730312
Start: 2602687
End: 2603262
Strand: Reverse
Name: yfeY
Synonym: SbBS512_E2804
Alternate gene names: 187730312
Gene position: 2603262-2602687 (Counterclockwise)
Preceding gene: 187734252
Following gene: 187732721
Centisome position: 56.4
GC content: 50.52
Gene sequence:
>576_bases ATGAAATCGCTGCGTTTAATGTTATGCGCTATGCCGTTGATGCTGACCGGCTGTTCCACGATGTCGTCAGTTAACTGGTC GGCCGCTAACCCGTGGAACTGGTTTGGATCGTCCACCAAAGTGAGCGAGCAGGGCGTGGGTGAATTAACGGCGTCCACAC CACTGCAAGAACAAGCCATTGCTGATGCGCTTGATGGCGATTATCGCCTGCGCAGCGGAATGAAAACCGCGAACGGCAAC GTGGTGCGCTTTTTTGAAGTGATGAAAGGCGACAACGTGGCGATGGTGATTAACGGCGATCAAGGCACGATCAGTCGCAT TGACGTGCTGGATAGCGATATTCCTGCTGACACCGGTGTTAAAATCGGTACACCGTTTAGCGACCTTTACAGCAAAGCAT TTGGCAATTGCCAAAAAGCTGATGGTGATGATAATCGTGCCGTCGAATGTAAAGCCGAAGGCAGTCAACATATTAGCTAC CAGTTCAGTGGGGAATGGCGTGGTCCTGAAGGGTTAATGCCTTCGGACGATACCCTGAAAAACTGGAAAGTCAGTAAAAT TATCTGGCGGCGTTAA
Upstream 100 bases:
>100_bases TAGCGCATCAGGCAATTTTGTGTTTGTCATCAACCTTTAACGGCACTTTTTGGTGAATTTGCACTCCAAGCAACGTTATT GAATAACCAAAGGAAGTGAC
Downstream 100 bases:
>100_bases TTTGCGTCTGAACAAACCGCCGCCGCGAAAAAACACGTAAAATAGCGCTCAACAATGCCACGGATTGCGTGGCATTCTTA TTTTCAGGAGGAACAATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGN VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR
Sequences:
>Translated_191_residues MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGN VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR >Mature_191_residues MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAIADALDGDYRLRSGMKTANGN VVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY QFSGEWRGPEGLMPSDDTLKNWKVSKIIWRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788772, Length=191, Percent_Identity=100, Blast_Score=397, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YFEY_ECOLI (P76537)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - EMBL: D21150 - PIR: G65017 - RefSeq: AP_003026.1 - RefSeq: NP_416927.1 - PDB: 2QZB - PDBsum: 2QZB - ProteinModelPortal: P76537 - SMR: P76537 - STRING: P76537 - EnsemblBacteria: EBESCT00000004269 - EnsemblBacteria: EBESCT00000017818 - GeneID: 946919 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW2425 - KEGG: eco:b2432 - EchoBASE: EB3918 - EcoGene: EG14166 - eggNOG: NOG05563 - GeneTree: EBGT00050000011078 - HOGENOM: HBG416748 - OMA: MPPDDIL - ProtClustDB: PRK10718 - BioCyc: EcoCyc:G7267-MONOMER - Genevestigator: P76537 - InterPro: IPR010938 - ProDom: PD105195
Pfam domain/function: PF06572 DUF1131
EC number: NA
Molecular weight: Translated: 20898; Mature: 20898
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV HHHCCCCHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCE KIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWRGPEGLMPSDDTLK ECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC NWKVSKIIWRR CEEEHHEEECC >Mature Secondary Structure MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQGVGELTASTPLQEQAI CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH ADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQGTISRIDVLDSDIPADTGV HHHCCCCHHHHCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCCE KIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISYQFSGEWRGPEGLMPSDDTLK ECCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC NWKVSKIIWRR CEEEHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 7764507