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The map label for this gene is ygaM

Identifier: 187730161

GI number: 187730161

Start: 2993279

End: 2993608

Strand: Reverse

Name: ygaM

Synonym: SbBS512_E3207

Alternate gene names: 187730161

Gene position: 2993608-2993279 (Counterclockwise)

Preceding gene: 187733814

Following gene: 187732285

Centisome position: 64.85

GC content: 54.24

Gene sequence:

>330_bases
ATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATCCAGAATGATGTCAATCAATTAGCTGACAG
CCTCGAATCTGTATTGAAGTCCTGGGGCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAGCTCAGGCGTTGC
TGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCGCGCGATGCCGTTGGCTGCGCGGATTCT
TTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCG
CAAATCGTAG

Upstream 100 bases:

>100_bases
TCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACTGAAAATTACATC
GAATTCTAATGGGGGATCAT

Downstream 100 bases:

>100_bases
TGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAA
TCCCCCTCCCCCGTCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADS
FVRERPWCSVGTAAAVGIFIGALLSMRKS

Sequences:

>Translated_109_residues
MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADS
FVRERPWCSVGTAAAVGIFIGALLSMRKS
>Mature_109_residues
MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGCADS
FVRERPWCSVGTAAAVGIFIGALLSMRKS

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli elaB and yqjD

Homologues:

Organism=Escherichia coli, GI1789027, Length=109, Percent_Identity=100, Blast_Score=222, Evalue=5e-60,
Organism=Escherichia coli, GI1789485, Length=99, Percent_Identity=39.3939393939394, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGAM_ECO57 (P0ADQ9)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E91070
- PIR:   H85914
- RefSeq:   NP_289222.1
- RefSeq:   NP_311560.2
- ProteinModelPortal:   P0ADQ9
- EnsemblBacteria:   EBESCT00000026864
- EnsemblBacteria:   EBESCT00000059920
- GeneID:   914751
- GeneID:   958113
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z3972
- KEGG:   ecs:ECs3533
- GeneTree:   EBGT00050000010837
- HOGENOM:   HBG648388
- OMA:   MEDHMLN
- ProtClustDB:   PRK10132
- BioCyc:   ECOL83334:ECS3533-MONOMER
- InterPro:   IPR010279

Pfam domain/function: PF05957 DUF883

EC number: NA

Molecular weight: Translated: 11847; Mature: 11847

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
MHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRAR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
MHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796