| Definition | Shigella boydii CDC 3083-94 chromosome, complete genome. |
|---|---|
| Accession | NC_010658 |
| Length | 4,615,997 |
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The map label for this gene is yfaP [H]
Identifier: 187730145
GI number: 187730145
Start: 676499
End: 676669
Strand: Direct
Name: yfaP [H]
Synonym: SbBS512_E0719
Alternate gene names: 187730145
Gene position: 676499-676669 (Clockwise)
Preceding gene: 187731587
Following gene: 187731557
Centisome position: 14.66
GC content: 48.54
Gene sequence:
>171_bases GTGTGCCACTTCAATATCAACTACTATGGTGGGCGCAGCGAAACGGAATTAACCACCGCCCAACTGACGCTGATCACCGA TGAAGGATCGGTCAATGAGAAACAGGAAACATTTATTGTACCGATGCGTAATGCTGGCGAGCTGACGCTGGTGAAAAGTT TTGACTGGTGA
Upstream 100 bases:
>100_bases GATTCGCGTTTAAACTCTGCGCTAAAATTTCTTTTTTTCATTGGAGCACCTGTGTTGTTCTGAGGTGAGCATATCACCTC TGTTCAGGTGGCCAAATTCA
Downstream 100 bases:
>100_bases TCCATCCCTTCACACAACCTGGCTCTCTCTTTTTTCAGATAAGACTGCTGGGCGATCTGCCGACGCCAGGATATAACCAT TAACAAGCGTCGGCAGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 56
Protein sequence:
>56_residues MCHFNINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
Sequences:
>Translated_56_residues MCHFNINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW >Mature_56_residues MCHFNINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
Specific function: Unknown
COG id: COG4676
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788556, Length=51, Percent_Identity=100, Blast_Score=108, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019220 - InterPro: IPR012039 [H]
Pfam domain/function: PF09906 DUF2135 [H]
EC number: NA
Molecular weight: Translated: 6400; Mature: 6400
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCHFNINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW CEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCC >Mature Secondary Structure MCHFNINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW CEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]