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The map label for this gene is yfiM

Identifier: 187730094

GI number: 187730094

Start: 2755450

End: 2755773

Strand: Reverse

Name: yfiM

Synonym: SbBS512_E2949

Alternate gene names: 187730094

Gene position: 2755773-2755450 (Counterclockwise)

Preceding gene: 187733429

Following gene: 187734146

Centisome position: 59.7

GC content: 53.7

Gene sequence:

>324_bases
TTGCGTATTCTTTTTGTCTGTTCGCTATTGTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGA
TAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGATGAGCCGGG
ATCGCAGTGCCATGTTTGGATTGATGTTCTCTGTCAGTTTGGGGGCGTCAAAAGAGCTTTGGGATAGCCGCCCCGAAGGG
AGCGGCTGGAGCTGGAAGGATTTGGCCTGGGATGTCGCCGGTGCAAGCACCGGCTATACCGTCTGGCAACTGACCCGTCA
CTAA

Upstream 100 bases:

>100_bases
CATCCGCCGTTTGCGCCGTATCCGCATCGACCGATTAATTAGCCGCATCCTGTAATCACAACCCCGTCCTGTACGGGGTT
TGTTTTTTGGAGGCCACGTT

Downstream 100 bases:

>100_bases
AGACGCATCCCCTTCCCTTTGCGATGTAGCATCAAAGAAACCAGAAACGCCACCACGGCCATCAAGGTCACATACCAGAA
GAAGGCAGTTTCCATTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEG
SGWSWKDLAWDVAGASTGYTVWQLTRH

Sequences:

>Translated_107_residues
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEG
SGWSWKDLAWDVAGASTGYTVWQLTRH
>Mature_107_residues
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEG
SGWSWKDLAWDVAGASTGYTVWQLTRH

Specific function: Unknown

COG id: COG5544

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693173, Length=107, Percent_Identity=100, Blast_Score=218, Evalue=7e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YFIM_ECOLI (P46126)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   M58699
- EMBL:   X75467
- EMBL:   X53027
- PIR:   A65037
- RefSeq:   AP_003172.1
- RefSeq:   NP_417081.2
- STRING:   P46126
- EnsemblBacteria:   EBESCT00000002133
- EnsemblBacteria:   EBESCT00000016647
- GeneID:   947060
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2570
- KEGG:   eco:b2586
- EchoBASE:   EB2700
- EcoGene:   EG12857
- eggNOG:   COG5544
- GeneTree:   EBGT00050000009628
- HOGENOM:   HBG416302
- OMA:   AGNEYAQ
- ProtClustDB:   PRK10759
- BioCyc:   EcoCyc:EG12857-MONOMER
- Genevestigator:   P46126
- InterPro:   IPR018736
- InterPro:   IPR017028
- PIRSF:   PIRSF034456

Pfam domain/function: PF10043 DUF2279

EC number: NA

Molecular weight: Translated: 11805; Mature: 11805

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFG
CHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHH
LMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH
HHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFG
CHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHH
LMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH
HHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2002065; 2118499; 7567469