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Identifier: 186685547

GI number:

Start: 6782709

End: 6786221

Strand: Reverse

Name: Not Available

Synonym: Npun_R5494

Alternate gene names: NA

Gene position: NA

Preceding gene: 186685549

Following gene: 186685546

Centisome position: NA

GC content: NA

Gene sequence:

>3513_bases
ATGTCATTTTCTTCTATTGTGCGTGCCTTAGCGCGATCGCCGCTCACCACTGAATTTATTTCTAAGCTAAACCGACAACA
AGAATTGCGGTTAAATGGCATTTCTCGATTGCCCAAGGGTTTGGTCGCTTCGGCATTGGCGCAAGCTCAGGGTAAGGATT
TATTTGTGGTTTGCGCCACTCTGGAAGAAGCTGGACGTGTTTATGCACAACTGGAGGCAATGGGATGGCAAACAGTACAT
TTTTACCCCACCTCCGAGGCTTCTCCCTACGAACCTTTTGACCCGGAAACTGAGATGAGTTGGGGACAAATGCAGGTATT
GGCAGATTTGGTAATGGGGAATGGGGAAGAAAACCAGATCCCATCCAATTCACAATTACCCAAGATGGCAATTGTGGCTA
CTCAAGGGGCGTTGCAACCACATTTGCCTCCACCAGAAGCTTTTGGGCAATTCTGTCTTACCCTGAAGCGGGGGATGGAA
TTAGACCTAAATGCCTTCAGTGAGAAAATAACTATTCTGGGGTATGAACGAGTACCTCTGGTGGAAACGGAAGGACAATG
GAGCCGAAGGGGTGATATTGTTGATGTTTTCCCAGTTTCATCTGAGTTTCCAGTCAGGTTGGAATGGTTTGGCGATGAAA
TTGAGCAAATGCGGGAATTTGACCCAGCAACCCAACGTTCTGCACTCGATAAAGTTGACCAGTTAATTCTTACCCCCACT
AGCTTTGCTCCCATCGTCATGGCGGCACTCAACAAGAGTGCTGAGTTCCGAGTGCTGAGTCCTGAGTTAAATCCTGACTC
AGAACTCAGCACTGAAAACTCATCATTGTTGGAGGGTAGTCGTCGCTTTTTGGGGTTGGCTTTTGAGCAACCAGCATCTC
TGCTAAATTACCTATCAAAAAATACTCTGATTGCTATTGATGAGCCAGAACAGTGTCATGCTCATAGCAATCGCTGGGTC
GAAAATGCTGAGGAACAATGGAGACTGGGGGCTGCAGAAGAGTCTAGCCAAGTACCGAAAATTCATCGGTCATTTGATGA
CTGTCTGGCTGACATTGCCAAATTTAAAACACTATATTTATCGGAACTGTCAGAGGAAAATAGTGGGATCAATCTTGCTA
GCCGATCGCTTCCAGTTACGCCACACCAGTTTGCTAAACTAGCTGAAACTATCCGTCAAGAACGCGATCGCAATTTCTCG
ATCTGGCTACTTTCTGCTCAACCTTCGCGTTCTGTCTCGCTATTGCAAGAACATGATTGTCCGGCTCAGTTTATCCCCAA
TCCCCGCGACTACCAAGCGATAGATAAGCTGCAAATTAACCATACTCCCATAGCCCTAAAATATTCTGGTCTTGCGGAAC
TCGAAGGTTTTATTCTGCCGACATACCGAATAGTAATCGTTACAGATCGGGAATTTTTTGGACAGCATTCTTTGGCGACT
CCCGGCTATATCCGCAAGCGCCACAAAGCTACTTCCAAGCAAGTTGATCCTAATAAGCTGCGTCCAGGTGATTATGTAGT
TCACAGAAATCATGGTGTTGGCAAATTTGTCAAACTGGAAAGTTTGACGATTAATGACGAAACCCGTGATTATTTAGTGG
TGCAGTATGCCGATGGGTTATTAAGAGTTGCCGCCGATCAAGTGGGTGCTTTATCCCGGTTCCGCGCCGGAGGTGATAAA
GCACCGGAACTCAACAGGATGACCGGTAAAGCTTGGGAAAATACCAAGAATAAAGTTCGCAAAGCCATCAAAAAATTGGC
GGTGGACTTGTTGAAACTGTATGCAGCGCGATCGCAACAACAAGGTTTTAGCTTTCCAAGTGATATGCCTTGGCAGGAAG
AACTAGAGGATTCTTTCCCTTACCAACCCACAACGGATCAACTCAAAGCTGTACAAGATGTCAAACGCGACATGGAAAGC
GATCGCCCAATGGATCGCTTAGTTTGTGGCGATGTCGGTTTTGGAAAGACGGAAGTGGCGATTCGTGCTGTTTTTAAAGC
AGTCACCGCCGGGAAACAAGTGGCACTCCTTGCGCCAACGACAATTTTAACACAGCAGCATTACCATACACTCAAAGAAC
GTTTTGCACCTTACCCGGTAAATGTCGGTTTGCTCAACCGTTTTCGTTCGGCTGAAGAGCGCCGCGATATTCAAAAGCGA
TTGGCAACGGGTGAACTAGATGTAGTTGTTGGTACACAGCAACTTTTGGGTAAAGGCGTGATGTTCCGGGATTTAGGACT
GTTGGTGGTGGATGAAGAACAGAGGTTTGGGGTAAACCAGAAAGAAAAAATTAAAAGCCTAAAAACTCAAGTGGACGTGC
TTACACTCTCCGCTACTCCCATTCCCCGGACTTTGTATATGTCCTTGTCGGGAATTCGGGAAATGAGTTTAATTACTACA
CCACCTCCAACCAGACGAGCGATTAAAACCCATCTGTCACCGATAAATTCTGAAAGTATCCGCAGTGCAATTCGTCAAGA
ATTAGATAGAGGTGGACAGGTTTTTTATGTAGTTCCGCGAGTGGACGGGATTGAAGAAACCACAGCCAATTTACGAGAAG
TGATACCGGGAGCTAGATTTGCGATCGCTCACGGTCAAATGGATGAAAGCGAGTTAGAATCAACCATGCTCACTTTCAGT
AATGGCGACGCAGACATCCTCGTTTGTACGACAATTATTGAATCTGGCTTAGATATTCCACGAGTCAACACCATTTTAAT
TGAAGATGCTCACCGCTTTGGATTGGCACAACTGTATCAATTACGCGGTCGTGTGGGACGTGCAGGGATACAAGCTCATG
CTTGGTTATTTTATCCCAAGCAACGGCAATTATCTGATGCGGCACGGCAACGATTACGAGCAATTCAAGAATTTACTCAG
CTAGGTTCTGGATATCAGCTAGCAATGCGCGATATGGAAATCAGAGGCGTGGGTAACTTGCTAGGTGCAGAACAATCCGG
TCAAATGGATGCCATCGGCTTTGATTTATACATGGAAATGCTGGAAGAAGCAATTCGGGAAATCCGAGGACAAGAAATTC
CGAAAGTGGAAGATACGCAGATTGACCTTAACCTCACGGCGTTTATCCCAGCAGATTATATTACTGATTTGGATCAAAAG
ATGAGTGCTTATCGGGCGGTGGCAACAGCTAAATCTAAATCAGAATTAAATCAGATTGCAGCCGAGTGGAGCGATCGCTA
TGGTACTTTACCAGTCTCTGCAAATCAACTTTTGCGAGTTATGGAACTCAAACAGCTAGCGAAAAAACTCGGATTTAGCC
GGATTAAACCAGAACAAAAGCAGCACGTAGTTTTAGAAACGCCGATGGAGGAACCCGCTTGGAATTTATTGGCGGCGAAT
TTACCAGACAATCTCAAGACGCGCTTTGTGTATTCTCCAGGTAAAGTCACAGTGCGCGGGTTAGGAGTTTTTAAAGCAGA
TCAACAATTGCAGAATTTGATTGATGCTTTTGGGAGAATGCAGGGTGCGATTCCAGAGGCAGCTGTTGTTTGA

Upstream 100 bases:

>100_bases
CACCGAAAGAATAAGAAGGCTGTCAACACTTTTAAAATAGTTGACATAAACTGCCTCAAGATTTTCTGACTCACAAAGAC
TCCCACCGCTAGTTGTACTT

Downstream 100 bases:

>100_bases
TCGGTAGAAAAAGATTAGTCATCAAGTGAAAACATATCTCAGACTTACTGAGAAGTAGTTTAGAGTAAAATAAGGTGTTC
AAAGCATAGACAATGACGAG

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1170_residues
MSFSSIVRALARSPLTTEFISKLNRQQELRLNGISRLPKGLVASALAQAQGKDLFVVCATLEEAGRVYAQLEAMGWQTVH
FYPTSEASPYEPFDPETEMSWGQMQVLADLVMGNGEENQIPSNSQLPKMAIVATQGALQPHLPPPEAFGQFCLTLKRGME
LDLNAFSEKITILGYERVPLVETEGQWSRRGDIVDVFPVSSEFPVRLEWFGDEIEQMREFDPATQRSALDKVDQLILTPT
SFAPIVMAALNKSAEFRVLSPELNPDSELSTENSSLLEGSRRFLGLAFEQPASLLNYLSKNTLIAIDEPEQCHAHSNRWV
ENAEEQWRLGAAEESSQVPKIHRSFDDCLADIAKFKTLYLSELSEENSGINLASRSLPVTPHQFAKLAETIRQERDRNFS
IWLLSAQPSRSVSLLQEHDCPAQFIPNPRDYQAIDKLQINHTPIALKYSGLAELEGFILPTYRIVIVTDREFFGQHSLAT
PGYIRKRHKATSKQVDPNKLRPGDYVVHRNHGVGKFVKLESLTINDETRDYLVVQYADGLLRVAADQVGALSRFRAGGDK
APELNRMTGKAWENTKNKVRKAIKKLAVDLLKLYAARSQQQGFSFPSDMPWQEELEDSFPYQPTTDQLKAVQDVKRDMES
DRPMDRLVCGDVGFGKTEVAIRAVFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPVNVGLLNRFRSAEERRDIQKR
LATGELDVVVGTQQLLGKGVMFRDLGLLVVDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITT
PPPTRRAIKTHLSPINSESIRSAIRQELDRGGQVFYVVPRVDGIEETTANLREVIPGARFAIAHGQMDESELESTMLTFS
NGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQRQLSDAARQRLRAIQEFTQ
LGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLEEAIREIRGQEIPKVEDTQIDLNLTAFIPADYITDLDQK
MSAYRAVATAKSKSELNQIAAEWSDRYGTLPVSANQLLRVMELKQLAKKLGFSRIKPEQKQHVVLETPMEEPAWNLLAAN
LPDNLKTRFVYSPGKVTVRGLGVFKADQQLQNLIDAFGRMQGAIPEAAVV

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA