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The map label for this gene is intZ [H]

Identifier: 186477839

GI number: 186477839

Start: 3472947

End: 3474125

Strand: Reverse

Name: intZ [H]

Synonym: Bphy_3095

Alternate gene names: 186477839

Gene position: 3474125-3472947 (Counterclockwise)

Preceding gene: 186477840

Following gene: 186477835

Centisome position: 99.85

GC content: 62.51

Gene sequence:

>1179_bases
ATGCCCAAAGTCGCGACACCCCTGAGCGAATCCCAGATCCGCGCATTGCAGCCCCGTGCGACGCGATACAGCGTCGCCGA
CGGCAAAGGCCTGATTCTCGAGGTGATGCCGACCGGAAAGAAGGTCTGGCGATTCCGCTACACGCTCGACGGGGCGCGGC
AGCCTATGGTCACCATCGGCGACTATCAGCTGATGTCATTACGGGTCGCGCGAGCCCGCGCGCAGAAGTATGCGGAAATC
GTGGCGAATGGCCTGTCGCCAGTCTCGACCGCGCGACAGGATCGCGGAGCCGAAAAGCGCGTCGATGTGCTGCGCGATGG
CGCCGAACTATATGTGGCTTCGGAAATCGCCCGCAAGTCCGATGAATATCGCCGCACCACACAGCGCGCGCTCGACAAGG
ACATCCTGCCCGCAATCGGCCACAAGCAGATCGCACAAGTCACGTCGGAAGACATCCAGTCGATCTGCGACACGATCAAA
AGTCGGGGCGCGCCGCAGATGGCGCTGCACGCTCGAAATGTCGCGAAGCGTTTGTTTGCTTTCCTGATTGCGCGGCAACT
CGCGACCATCAATCCCGCCGAATCCGTCGCGGCGCGATCGATCGCGACGCAGCACGGACGCACTCGCATCCTGACAGCGG
CCGAAATCGGCGCGTTGCTGCGCGCGATCTACACGTCGCGTATCAAGCGGCCGTTGAAGCTCGCGCTGCATTTGCTGGTG
CTGACAATGGCCAGCAAATCCGAACTCACCGAAGCCACATGGCGCGAGTTCGATCTCGACGGTGGCGTCTGGACGATTCC
GGCATCACGCGTCGGTAGCGCCCGCGCGCGGCGCATCCCGCTTTCGCAGCAGGCTCTCGCGATGCTTCGCGAGTTGCGCG
ATATGAAGCACAGCCGTACTTACGTCTTTCCGTCGACGCGCGGTGACGACGACCGGCCGATTGCAAAGGGCACGCTGAAT
CAGGCGGTCAAGACGCTAAGTTTGGAGACCGACCGGTTCGTCCTAAGCGATCTCAGCCGCGCGGGTTTGCATCACCAGCG
CGGCCTTCTGCGCTCCACGATGGGCGAACAGGCAGTGGTGAACTCGGACGGCGCCGCAGTTTCGCATGCCATGCAGAGCT
GGGCTGACTTCGTAGAACGGCAGTTTGGTACGGAGTCGCATGAGACGGGCCGAGGTTAA

Upstream 100 bases:

>100_bases
GGTTTGTATCCACAGACCGGTCGCGACGATCCGCGCATTTATTTTCGGTACACAAACGCGTAAGCTGCGTTTTCCGCGCG
CCTCGTGTACCGAAACCCTA

Downstream 100 bases:

>100_bases
ACGAATTGACCACTCGTCAGTTCCTTTTTCGGTACACAATCTTCGACGCGTCGCCCTCAAAACCTTGTCCAGCAACGAAG
ATTCGCACTTTCACGTGGTT

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPKVATPLSESQIRALQPRATRYSVADGKGLILEVMPTGKKVWRFRYTLDGARQPMVTIGDYQLMSLRVARARAQKYAEI
VANGLSPVSTARQDRGAEKRVDVLRDGAELYVASEIARKSDEYRRTTQRALDKDILPAIGHKQIAQVTSEDIQSICDTIK
SRGAPQMALHARNVAKRLFAFLIARQLATINPAESVAARSIATQHGRTRILTAAEIGALLRAIYTSRIKRPLKLALHLLV
LTMASKSELTEATWREFDLDGGVWTIPASRVGSARARRIPLSQQALAMLRELRDMKHSRTYVFPSTRGDDDRPIAKGTLN
QAVKTLSLETDRFVLSDLSRAGLHHQRGLLRSTMGEQAVVNSDGAAVSHAMQSWADFVERQFGTESHETGRG

Sequences:

>Translated_392_residues
MPKVATPLSESQIRALQPRATRYSVADGKGLILEVMPTGKKVWRFRYTLDGARQPMVTIGDYQLMSLRVARARAQKYAEI
VANGLSPVSTARQDRGAEKRVDVLRDGAELYVASEIARKSDEYRRTTQRALDKDILPAIGHKQIAQVTSEDIQSICDTIK
SRGAPQMALHARNVAKRLFAFLIARQLATINPAESVAARSIATQHGRTRILTAAEIGALLRAIYTSRIKRPLKLALHLLV
LTMASKSELTEATWREFDLDGGVWTIPASRVGSARARRIPLSQQALAMLRELRDMKHSRTYVFPSTRGDDDRPIAKGTLN
QAVKTLSLETDRFVLSDLSRAGLHHQRGLLRSTMGEQAVVNSDGAAVSHAMQSWADFVERQFGTESHETGRG
>Mature_391_residues
PKVATPLSESQIRALQPRATRYSVADGKGLILEVMPTGKKVWRFRYTLDGARQPMVTIGDYQLMSLRVARARAQKYAEIV
ANGLSPVSTARQDRGAEKRVDVLRDGAELYVASEIARKSDEYRRTTQRALDKDILPAIGHKQIAQVTSEDIQSICDTIKS
RGAPQMALHARNVAKRLFAFLIARQLATINPAESVAARSIATQHGRTRILTAAEIGALLRAIYTSRIKRPLKLALHLLVL
TMASKSELTEATWREFDLDGGVWTIPASRVGSARARRIPLSQQALAMLRELRDMKHSRTYVFPSTRGDDDRPIAKGTLNQ
AVKTLSLETDRFVLSDLSRAGLHHQRGLLRSTMGEQAVVNSDGAAVSHAMQSWADFVERQFGTESHETGRG

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=333, Percent_Identity=30.03003003003, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI1788974, Length=330, Percent_Identity=25.4545454545455, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788690, Length=397, Percent_Identity=25.6926952141058, Blast_Score=116, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43429; Mature: 43298

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVATPLSESQIRALQPRATRYSVADGKGLILEVMPTGKKVWRFRYTLDGARQPMVTIG
CCCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEC
DYQLMSLRVARARAQKYAEIVANGLSPVSTARQDRGAEKRVDVLRDGAELYVASEIARKS
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCC
DEYRRTTQRALDKDILPAIGHKQIAQVTSEDIQSICDTIKSRGAPQMALHARNVAKRLFA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FLIARQLATINPAESVAARSIATQHGRTRILTAAEIGALLRAIYTSRIKRPLKLALHLLV
HHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTMASKSELTEATWREFDLDGGVWTIPASRVGSARARRIPLSQQALAMLRELRDMKHSRT
HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCE
YVFPSTRGDDDRPIAKGTLNQAVKTLSLETDRFVLSDLSRAGLHHQRGLLRSTMGEQAVV
EECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEE
NSDGAAVSHAMQSWADFVERQFGTESHETGRG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PKVATPLSESQIRALQPRATRYSVADGKGLILEVMPTGKKVWRFRYTLDGARQPMVTIG
CCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEC
DYQLMSLRVARARAQKYAEIVANGLSPVSTARQDRGAEKRVDVLRDGAELYVASEIARKS
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCC
DEYRRTTQRALDKDILPAIGHKQIAQVTSEDIQSICDTIKSRGAPQMALHARNVAKRLFA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FLIARQLATINPAESVAARSIATQHGRTRILTAAEIGALLRAIYTSRIKRPLKLALHLLV
HHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTMASKSELTEATWREFDLDGGVWTIPASRVGSARARRIPLSQQALAMLRELRDMKHSRT
HHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCE
YVFPSTRGDDDRPIAKGTLNQAVKTLSLETDRFVLSDLSRAGLHHQRGLLRSTMGEQAVV
EECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEE
NSDGAAVSHAMQSWADFVERQFGTESHETGRG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]