Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is yaeQ [H]

Identifier: 186477834

GI number: 186477834

Start: 3469062

End: 3469703

Strand: Reverse

Name: yaeQ [H]

Synonym: Bphy_3090

Alternate gene names: 186477834

Gene position: 3469703-3469062 (Counterclockwise)

Preceding gene: 186477835

Following gene: 186477832

Centisome position: 99.73

GC content: 63.71

Gene sequence:

>642_bases
ATGGCAAGGTACGCCGACTCTCTATTCACTATCCGGTCCGCGTTTGCCGGACCAGGTTGTAGCATGGCTCTCAAATCGAC
AATCTATAAGGCTGAACTCCAGATCGCCGACATGGACCGGCACTATTACGCCGACCACTCGCTGACGATCGCGCTCCACC
CGTCGGAAACCAACGAACGGATGATGGTTCGCGTCGCCGCCTTCGCGCTCTTCGCGCAGGAACGCCTCGAGTTCTGCAAG
GGCCTGTCGGACATCGACGAGCCGGATCTCTGGGCCAAGGATCTTACCGGCGCCATCGATACCTGGATCGAGGTCGGCCA
GCCCGACGAACGCCGCATCGCGAAGGCAAGCGGCCGCGCCAACGAAGTGATCGTGATCGCGTACGGTGGCCGGACGTCCG
ACATTTGGTGGCAGGGCGTACGCAACAAGGTCGAGCGCATGCGCAACGTGACCGTGTGGTCGCTCGGCGAAGATGTCGCG
CCGGCGCTCGGTGCGCTCGCCGAACGGACAATGCGTCTGCAATGCACCGTCCAGGACAACGCGGCGTGGCTCGGCACAGA
AACCGCCGATGCCGTGCCCATCGAGTGGACGGTTCTCAAAGCTGCGGCGAACGCGCGTCCGGCAGCGCACGGCGGACGGT
GA

Upstream 100 bases:

>100_bases
GACGCGGGCCTCGCGGCCTACGTCTCGGCAACCCCGGCAAATGTGTTTCACCGGCGAGGAGCGCGACCGAGGCGTGACCG
CTGCAAGGCAGGGGACGAAC

Downstream 100 bases:

>100_bases
TCTGCTAACGAGCCGCCGGTGCTGTGTACCAAAAAACAGGGCTGAAAATCAGGCTGCCGAAATCGGGGGCCCTTTGATTT
CGACCATGTTATCCTCTGGA

Product: YaeQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNERMMVRVAAFALFAQERLEFCK
GLSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRANEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVA
PALGALAERTMRLQCTVQDNAAWLGTETADAVPIEWTVLKAAANARPAAHGGR

Sequences:

>Translated_213_residues
MARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNERMMVRVAAFALFAQERLEFCK
GLSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRANEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVA
PALGALAERTMRLQCTVQDNAAWLGTETADAVPIEWTVLKAAANARPAAHGGR
>Mature_212_residues
ARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNERMMVRVAAFALFAQERLEFCKG
LSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRANEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVAP
ALGALAERTMRLQCTVQDNAAWLGTETADAVPIEWTVLKAAANARPAAHGGR

Specific function: Unknown

COG id: COG4681

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786388, Length=166, Percent_Identity=48.1927710843374, Blast_Score=167, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009822 [H]

Pfam domain/function: PF07152 YaeQ [H]

EC number: NA

Molecular weight: Translated: 23541; Mature: 23410

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNER
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCEEECCCEEEEEECCCCCCHH
MMVRVAAFALFAQERLEFCKGLSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
NEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVAPALGALAERTMRLQCTVQDN
CEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCEEEEEEEEECC
AAWLGTETADAVPIEWTVLKAAANARPAAHGGR
CEEECCCCCCCCCEEEEEEEHHCCCCCCCCCCC
>Mature Secondary Structure 
ARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNER
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCEEECCCEEEEEECCCCCCHH
MMVRVAAFALFAQERLEFCKGLSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
NEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVAPALGALAERTMRLQCTVQDN
CEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCEEEEEEEEECC
AAWLGTETADAVPIEWTVLKAAANARPAAHGGR
CEEECCCCCCCCCEEEEEEEHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]