| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yaeQ [H]
Identifier: 186477834
GI number: 186477834
Start: 3469062
End: 3469703
Strand: Reverse
Name: yaeQ [H]
Synonym: Bphy_3090
Alternate gene names: 186477834
Gene position: 3469703-3469062 (Counterclockwise)
Preceding gene: 186477835
Following gene: 186477832
Centisome position: 99.73
GC content: 63.71
Gene sequence:
>642_bases ATGGCAAGGTACGCCGACTCTCTATTCACTATCCGGTCCGCGTTTGCCGGACCAGGTTGTAGCATGGCTCTCAAATCGAC AATCTATAAGGCTGAACTCCAGATCGCCGACATGGACCGGCACTATTACGCCGACCACTCGCTGACGATCGCGCTCCACC CGTCGGAAACCAACGAACGGATGATGGTTCGCGTCGCCGCCTTCGCGCTCTTCGCGCAGGAACGCCTCGAGTTCTGCAAG GGCCTGTCGGACATCGACGAGCCGGATCTCTGGGCCAAGGATCTTACCGGCGCCATCGATACCTGGATCGAGGTCGGCCA GCCCGACGAACGCCGCATCGCGAAGGCAAGCGGCCGCGCCAACGAAGTGATCGTGATCGCGTACGGTGGCCGGACGTCCG ACATTTGGTGGCAGGGCGTACGCAACAAGGTCGAGCGCATGCGCAACGTGACCGTGTGGTCGCTCGGCGAAGATGTCGCG CCGGCGCTCGGTGCGCTCGCCGAACGGACAATGCGTCTGCAATGCACCGTCCAGGACAACGCGGCGTGGCTCGGCACAGA AACCGCCGATGCCGTGCCCATCGAGTGGACGGTTCTCAAAGCTGCGGCGAACGCGCGTCCGGCAGCGCACGGCGGACGGT GA
Upstream 100 bases:
>100_bases GACGCGGGCCTCGCGGCCTACGTCTCGGCAACCCCGGCAAATGTGTTTCACCGGCGAGGAGCGCGACCGAGGCGTGACCG CTGCAAGGCAGGGGACGAAC
Downstream 100 bases:
>100_bases TCTGCTAACGAGCCGCCGGTGCTGTGTACCAAAAAACAGGGCTGAAAATCAGGCTGCCGAAATCGGGGGCCCTTTGATTT CGACCATGTTATCCTCTGGA
Product: YaeQ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNERMMVRVAAFALFAQERLEFCK GLSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRANEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVA PALGALAERTMRLQCTVQDNAAWLGTETADAVPIEWTVLKAAANARPAAHGGR
Sequences:
>Translated_213_residues MARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNERMMVRVAAFALFAQERLEFCK GLSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRANEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVA PALGALAERTMRLQCTVQDNAAWLGTETADAVPIEWTVLKAAANARPAAHGGR >Mature_212_residues ARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNERMMVRVAAFALFAQERLEFCKG LSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRANEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVAP ALGALAERTMRLQCTVQDNAAWLGTETADAVPIEWTVLKAAANARPAAHGGR
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=166, Percent_Identity=48.1927710843374, Blast_Score=167, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 23541; Mature: 23410
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNER CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCEEECCCEEEEEECCCCCCHH MMVRVAAFALFAQERLEFCKGLSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC NEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVAPALGALAERTMRLQCTVQDN CEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCEEEEEEEEECC AAWLGTETADAVPIEWTVLKAAANARPAAHGGR CEEECCCCCCCCCEEEEEEEHHCCCCCCCCCCC >Mature Secondary Structure ARYADSLFTIRSAFAGPGCSMALKSTIYKAELQIADMDRHYYADHSLTIALHPSETNER CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEECCCEEECCCEEEEEECCCCCCHH MMVRVAAFALFAQERLEFCKGLSDIDEPDLWAKDLTGAIDTWIEVGQPDERRIAKASGRA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC NEVIVIAYGGRTSDIWWQGVRNKVERMRNVTVWSLGEDVAPALGALAERTMRLQCTVQDN CEEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCEEEEEEEEECC AAWLGTETADAVPIEWTVLKAAANARPAAHGGR CEEECCCCCCCCCEEEEEEEHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]