| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is mnmG
Identifier: 186477785
GI number: 186477785
Start: 3412289
End: 3414247
Strand: Reverse
Name: mnmG
Synonym: Bphy_3039
Alternate gene names: 186477785
Gene position: 3414247-3412289 (Counterclockwise)
Preceding gene: 186477786
Following gene: 186477784
Centisome position: 98.13
GC content: 60.23
Gene sequence:
>1959_bases ATGCTTTATCCCACAGAGTTTGACGTAATAGTCGTTGGTGGCGGTCACGCCGGCACAGAAGCCGCGCTCGCGTCCGCGCG TATGGGCAACAAGACGCTCTTGCTGACCCACAACATCGAGACCCTCGGCCAGATGAGCTGCAATCCGTCGATTGGTGGCA TTGGCAAAGGCCATCTGGTAAAGGAGGTCGACGCGCTTGGCGGCGCGATGGCAGCTGCCACGGACGAAGGCGGCATCCAG TTCCGCATCCTGAACTCGTCGAAGGGACCCGCTGTTCGGGCGACTCGCGCACAGGCTGACCGTATCCTCTATAAGGCTGC CATCCGTCATCGCCTGGAGAATCAGCCGAATCTCTGGCTTTTCCAGCAGTCGGTCGACGATTTGATGGTCGAAGGCGACC GTGTTGTCGGTGCTGTGACGCAGGTTGGCGTCCGTTTTCGCTCGCGTGCCGTCGTTTTGACGGCCGGCACGTTCCTTGAC GGGAAGATCCACGTCGGCCTCAACAACTACACCGGCGGCCGGGCAGGTGATCCGGCAGCTGTGTCGCTGTCCGCACGTCT GAAGGAGTTGAAGCTCCCACAGGGGCGGCTAAAGACGGGGACGCCGCCGCGCATCGACGGCCGTACGATCGATTTCTCGA AGCTTGAAGAGCAACCGGGCGATCTCGATCCGATCCCGGTCTTCTCATTTCTCGGGCGGGTCGAGCAGCACCCACGACAA GTACCGTGCTGGGTGACGCATACCAACGCCCAGACGCACGACATCATCCGTAGCGGTTTGGACCGTTCGCCGATGTATAC GGGCGTTATCGAAGGCGTTGGACCGCGGTATTGTCCTTCGATTGAGGACAAGATTCACCGCTTTGCATCCAAAGAGTCGC ACCAGATCTTCCTGGAGCCGGAAGGACTGACCACTAACGAGTTCTATCCGAACGGTATCTCGACGAGCCTCCCTTTCGAC GTACAGCTGGAACTGGTTCGTTCGATGGTGGGGCTGGAGCACGCCCACATCCTGCGACCGGGCTACGCCATCGAGTACGA CTACTTCGATCCGCGCGGGCTGAAGGCCTCGTTGGAGACGAAGGCTATCAGTGGCTTGTTCTTCGCCGGGCAGATTAACG GAACCACAGGTTACGAAGAGGCTGCTGCCCAAGGTTTGCTGGCGGGCATCAATGCCGGCCTGTACGTTCAGAGTAAAGGA CCGTGGTGTCCGCGCCGCGATCAGGCCTATCTGGGCGTGCTGGTAGACGACCTCGTAACCCGCGGCGTCTCGGAGCCGTA TCGCATGTTCACGAGCCGTGCCGAGTACCGCTTGAGCCTGCGCGAGGACAACGCGGACATGCGACTGACCGAGATTGGCC GCGAGTTGGGTGTGGTTGATGACGTTCGTTGGGACGCATTCAGCCGCAAGCGCGACGCTGTTTCACGTGAAACAGAACGA CTGCGGACCACGTGGGTCAATCCGAAGACGCTTTCATCTGAGGAAGCTACCGCCCTGCTGGGCAAGCCGATCGACCACGA ATACAGCCTCGCTGACCTGTTGCGACGTCCGGGCGTTTCCTACGACGGCATTTGCGGATTGCGCGAAGGTACTTGCGGAC CGGACGAAGCGCTGGCCCACGACGACGTGCTGCTCGCGCAGATCAAGGAGCAGATCGAAATCGGCGTTAAATACCAAGGG TATATCGAGCGGCAAGCCGGAGAAATCGAGCGAAACGAAGCACATGAGAACACCCGGTTGCCGGAAAACCTAGACTACAC GGAAGTTCGTGGGTTGTCCTTCGAAGCGCGTCAAAAGCTGACGCAATTTCGGCCCGAAACGATCGGTCAGGCGTCGCGCA TTTCGGGCATCACGCCGGCCGCGATCTCCTTGTTGATGGTTCACCTCAAGCGCGGCCTAGGTCGGCGAGCGCCCAGGCCT GCTGGCGCCGGTAACGACAACTCTCCGGTGGCTCAATGA
Upstream 100 bases:
>100_bases TTTATGCCGGTCGTACGGAATTCGGGCCAAAAGCGAACCCGCTATAATTTCGCCCATACTTTTCTTTTAGGCTCACGCTG GATCCCGCGTGAGATCCGCG
Downstream 100 bases:
>100_bases CGGCGCGGTCGGATGCAGTGGTGAGCCGTCAAGCGCTCGTCGGTTTGCTGGATGAGGGCGTGCATGAGTTGGGATTCGAC CTTCGCGCAGATCAGAAAGG
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MLYPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQ FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQSVDDLMVEGDRVVGAVTQVGVRFRSRAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRVEQHPRQ VPCWVTHTNAQTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD VQLELVRSMVGLEHAHILRPGYAIEYDYFDPRGLKASLETKAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQSKG PWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER LRTTWVNPKTLSSEEATALLGKPIDHEYSLADLLRRPGVSYDGICGLREGTCGPDEALAHDDVLLAQIKEQIEIGVKYQG YIERQAGEIERNEAHENTRLPENLDYTEVRGLSFEARQKLTQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRAPRP AGAGNDNSPVAQ
Sequences:
>Translated_652_residues MLYPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQ FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQSVDDLMVEGDRVVGAVTQVGVRFRSRAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRVEQHPRQ VPCWVTHTNAQTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD VQLELVRSMVGLEHAHILRPGYAIEYDYFDPRGLKASLETKAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQSKG PWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER LRTTWVNPKTLSSEEATALLGKPIDHEYSLADLLRRPGVSYDGICGLREGTCGPDEALAHDDVLLAQIKEQIEIGVKYQG YIERQAGEIERNEAHENTRLPENLDYTEVRGLSFEARQKLTQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRAPRP AGAGNDNSPVAQ >Mature_652_residues MLYPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQ FRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWLFQQSVDDLMVEGDRVVGAVTQVGVRFRSRAVVLTAGTFLD GKIHVGLNNYTGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRVEQHPRQ VPCWVTHTNAQTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFD VQLELVRSMVGLEHAHILRPGYAIEYDYFDPRGLKASLETKAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQSKG PWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER LRTTWVNPKTLSSEEATALLGKPIDHEYSLADLLRRPGVSYDGICGLREGTCGPDEALAHDDVLLAQIKEQIEIGVKYQG YIERQAGEIERNEAHENTRLPENLDYTEVRGLSFEARQKLTQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRAPRP AGAGNDNSPVAQ
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=664, Percent_Identity=43.6746987951807, Blast_Score=478, Evalue=1e-134, Organism=Homo sapiens, GI19882217, Length=689, Percent_Identity=42.0899854862119, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI183227703, Length=704, Percent_Identity=41.1931818181818, Blast_Score=459, Evalue=1e-129, Organism=Escherichia coli, GI2367273, Length=638, Percent_Identity=68.025078369906, Blast_Score=883, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=633, Percent_Identity=41.2322274881517, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6321202, Length=633, Percent_Identity=45.6556082148499, Blast_Score=508, Evalue=1e-144, Organism=Drosophila melanogaster, GI24658174, Length=643, Percent_Identity=46.0342146189736, Blast_Score=497, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_BURP8 (B2JJL1)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001859255.1 - ProteinModelPortal: B2JJL1 - SMR: B2JJL1 - GeneID: 6244520 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_3039 - HOGENOM: HBG284774 - OMA: GIQFRVL - ProtClustDB: PRK05192 - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 71539; Mature: 71539
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL HHHHHHCCHHEECCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEE FQQSVDDLMVEGDRVVGAVTQVGVRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA ECCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECEEECCEEEEEECCCCCCCCCCCCE VSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRVEQHPRQ EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCC VPCWVTHTNAQTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP CCEEEEECCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC EGLTTNEFYPNGISTSLPFDVQLELVRSMVGLEHAHILRPGYAIEYDYFDPRGLKASLET CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHEECCCEEEEECCCCCCCCCCCHHH KAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQSKGPWCPRRDQAYLGVLVDDLVT HHHCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH RGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER HCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRTTWVNPKTLSSEEATALLGKPIDHEYSLADLLRRPGVSYDGICGLREGTCGPDEALAH HHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCC DDVLLAQIKEQIEIGVKYQGYIERQAGEIERNEAHENTRLPENLDYTEVRGLSFEARQKL CHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHH TQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRAPRPAGAGNDNSPVAQ HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLYPTEFDVIVVGGGHAGTEAALASARMGNKTLLLTHNIETLGQMSCNPSIGGIGKGHLV CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH KEVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRILYKAAIRHRLENQPNLWL HHHHHHCCHHEECCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEE FQQSVDDLMVEGDRVVGAVTQVGVRFRSRAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAA ECCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECEEECCEEEEEECCCCCCCCCCCCE VSLSARLKELKLPQGRLKTGTPPRIDGRTIDFSKLEEQPGDLDPIPVFSFLGRVEQHPRQ EEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCC VPCWVTHTNAQTHDIIRSGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEP CCEEEEECCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECC EGLTTNEFYPNGISTSLPFDVQLELVRSMVGLEHAHILRPGYAIEYDYFDPRGLKASLET CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHEECCCEEEEECCCCCCCCCCCHHH KAISGLFFAGQINGTTGYEEAAAQGLLAGINAGLYVQSKGPWCPRRDQAYLGVLVDDLVT HHHCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH RGVSEPYRMFTSRAEYRLSLREDNADMRLTEIGRELGVVDDVRWDAFSRKRDAVSRETER HCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRTTWVNPKTLSSEEATALLGKPIDHEYSLADLLRRPGVSYDGICGLREGTCGPDEALAH HHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCC DDVLLAQIKEQIEIGVKYQGYIERQAGEIERNEAHENTRLPENLDYTEVRGLSFEARQKL CHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHH TQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRAPRPAGAGNDNSPVAQ HHCCCHHCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA