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The map label for this gene is yfbG [C]

Identifier: 186477741

GI number: 186477741

Start: 3355485

End: 3356426

Strand: Reverse

Name: yfbG [C]

Synonym: Bphy_2995

Alternate gene names: 186477741

Gene position: 3356426-3355485 (Counterclockwise)

Preceding gene: 186477742

Following gene: 186477740

Centisome position: 96.47

GC content: 62.95

Gene sequence:

>942_bases
GTGAACGCACAGTCGGTCCTGATCACGGGCGGCGCGGGGTTTCTCGGCTCGCATCTGTGCGACCGGCTGGTTGCGGCCGG
TCACGACGTGATGTGCGTGGACAACTTCCATACGGGCAGCAAGCAGACCATTCACCACCTGATCGGCAAGGTGAATTTCG
AGGTGATACGCCATGACGTGTGGCTGCCGCTGTACGTCGAAGCGGACCGCGTGTTCAACATGGCATGTCCCGCGAGCCCT
GTGCATTACCAGAGCGATCCCGTGTCGACCGTGAAGACGGCCGTGCTCGGCGCAATCAACATGCTCGGGCTTGCGAAGCG
CTGCGGCGCGCGCATTCTGCAGGCGTCGACGAGCGAAGTCTACGGCGACGCGCAGCAGCATCCGCAGCGCGAGACATACT
GGGGCAATGTGAACCCGAACGGGCCGCGCGCCTGTTACGACGAAGGCAAGCGCTGCGCGGAAACGCTGTTCTTCGATTAT
CACCGTCAGCACGGCGTCGACATTCGCATCGCGCGAATCTTCAACACGTACGGTCCGCGTATGCGTCCCGACGATGGCCG
CGTGGTGTCGAACTTCATCATGCAGGCGCTGCACGGCGAACCGATCACGCTGTACGGCGACGGCAGCCAGACGCGTTCGT
TCTGCTATGTCGACGATCTCGTCGAAGGGCTAATGCGCCTGATGAATCACGAAGGTGAGCCGGGGCCGTTCAACATCGGC
AATCCGGGCGAGATCACGATCCGCGAGCTCGCGGAGATGGTGTTGCGTCTCACGGGCTCGCGCTCGCGCATCCAGTACCG
ACCGCTGCCGCCCGACGATCCCGTGCAGCGTCGCCCCGACATCGCGAAGGCCCGCGAGCATCTCGACTGGCAACCGGGCG
TGGCGCTCGAAGACGGTCTCAAGGAGACCATCGCGTACTTCAAAAAGGTAGTGAACCAATGA

Upstream 100 bases:

>100_bases
CCTCGCCGCTGTGCGACGCCGCACGCTTCGCGCGCAACTTCGAAGCGGCGCTGCACGGCATGTGGGAACAACGCGTCGCG
CAGGTCGCGGAGGCGGCGCA

Downstream 100 bases:

>100_bases
CTTGCGATCTGATTGAAGCGGCTTGTCCCGTTTGCTCGAACTCGGTAGCCGCGCGCTTTTTCCCGGCGGGCGAGCAGACG
CTGGCGACGCTCGCGTGGCC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNAQSVLITGGAGFLGSHLCDRLVAAGHDVMCVDNFHTGSKQTIHHLIGKVNFEVIRHDVWLPLYVEADRVFNMACPASP
VHYQSDPVSTVKTAVLGAINMLGLAKRCGARILQASTSEVYGDAQQHPQRETYWGNVNPNGPRACYDEGKRCAETLFFDY
HRQHGVDIRIARIFNTYGPRMRPDDGRVVSNFIMQALHGEPITLYGDGSQTRSFCYVDDLVEGLMRLMNHEGEPGPFNIG
NPGEITIRELAEMVLRLTGSRSRIQYRPLPPDDPVQRRPDIAKAREHLDWQPGVALEDGLKETIAYFKKVVNQ

Sequences:

>Translated_313_residues
MNAQSVLITGGAGFLGSHLCDRLVAAGHDVMCVDNFHTGSKQTIHHLIGKVNFEVIRHDVWLPLYVEADRVFNMACPASP
VHYQSDPVSTVKTAVLGAINMLGLAKRCGARILQASTSEVYGDAQQHPQRETYWGNVNPNGPRACYDEGKRCAETLFFDY
HRQHGVDIRIARIFNTYGPRMRPDDGRVVSNFIMQALHGEPITLYGDGSQTRSFCYVDDLVEGLMRLMNHEGEPGPFNIG
NPGEITIRELAEMVLRLTGSRSRIQYRPLPPDDPVQRRPDIAKAREHLDWQPGVALEDGLKETIAYFKKVVNQ
>Mature_313_residues
MNAQSVLITGGAGFLGSHLCDRLVAAGHDVMCVDNFHTGSKQTIHHLIGKVNFEVIRHDVWLPLYVEADRVFNMACPASP
VHYQSDPVSTVKTAVLGAINMLGLAKRCGARILQASTSEVYGDAQQHPQRETYWGNVNPNGPRACYDEGKRCAETLFFDY
HRQHGVDIRIARIFNTYGPRMRPDDGRVVSNFIMQALHGEPITLYGDGSQTRSFCYVDDLVEGLMRLMNHEGEPGPFNIG
NPGEITIRELAEMVLRLTGSRSRIQYRPLPPDDPVQRRPDIAKAREHLDWQPGVALEDGLKETIAYFKKVVNQ

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=306, Percent_Identity=59.1503267973856, Blast_Score=387, Evalue=1e-108,
Organism=Homo sapiens, GI7657641, Length=328, Percent_Identity=27.4390243902439, Blast_Score=114, Evalue=8e-26,
Organism=Escherichia coli, GI1788589, Length=347, Percent_Identity=27.9538904899135, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI48994969, Length=337, Percent_Identity=24.0356083086053, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1788353, Length=339, Percent_Identity=24.7787610619469, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788365, Length=330, Percent_Identity=24.2424242424242, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786974, Length=328, Percent_Identity=24.0853658536585, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17539532, Length=311, Percent_Identity=56.5916398713826, Blast_Score=365, Evalue=1e-101,
Organism=Caenorhabditis elegans, GI115532424, Length=328, Percent_Identity=25.609756097561, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17568069, Length=332, Percent_Identity=26.2048192771084, Blast_Score=92, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6319493, Length=334, Percent_Identity=22.1556886227545, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356223, Length=307, Percent_Identity=57.328990228013, Blast_Score=373, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 35009; Mature: 35009

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQSVLITGGAGFLGSHLCDRLVAAGHDVMCVDNFHTGSKQTIHHLIGKVNFEVIRHDV
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
WLPLYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRCGARILQASTSEV
CEEEEEEHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGDAQQHPQRETYWGNVNPNGPRACYDEGKRCAETLFFDYHRQHGVDIRIARIFNTYGPR
HCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCC
MRPDDGRVVSNFIMQALHGEPITLYGDGSQTRSFCYVDDLVEGLMRLMNHEGEPGPFNIG
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCC
NPGEITIRELAEMVLRLTGSRSRIQYRPLPPDDPVQRRPDIAKAREHLDWQPGVALEDGL
CCCCEEHHHHHHHHHHHCCCCCCEEECCCCCCCHHHCCCCHHHHHHCCCCCCCCHHHHHH
KETIAYFKKVVNQ
HHHHHHHHHHHCC
>Mature Secondary Structure
MNAQSVLITGGAGFLGSHLCDRLVAAGHDVMCVDNFHTGSKQTIHHLIGKVNFEVIRHDV
CCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
WLPLYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRCGARILQASTSEV
CEEEEEEHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGDAQQHPQRETYWGNVNPNGPRACYDEGKRCAETLFFDYHRQHGVDIRIARIFNTYGPR
HCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCC
MRPDDGRVVSNFIMQALHGEPITLYGDGSQTRSFCYVDDLVEGLMRLMNHEGEPGPFNIG
CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCC
NPGEITIRELAEMVLRLTGSRSRIQYRPLPPDDPVQRRPDIAKAREHLDWQPGVALEDGL
CCCCEEHHHHHHHHHHHCCCCCCEEECCCCCCCHHHCCCCHHHHHHCCCCCCCCHHHHHH
KETIAYFKKVVNQ
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]