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The map label for this gene is fliR [H]

Identifier: 186477690

GI number: 186477690

Start: 3298166

End: 3298948

Strand: Direct

Name: fliR [H]

Synonym: Bphy_2943

Alternate gene names: 186477690

Gene position: 3298166-3298948 (Clockwise)

Preceding gene: 186477689

Following gene: 186477694

Centisome position: 94.8

GC content: 60.41

Gene sequence:

>783_bases
ATGTTTTCCGTCACCTACGAGCAGCTGAACGTCTGGCTCACCGCGTTCCTGTGGCCGTTCGTGCGGATACTCGCGCTGAT
GGCGACGGCGCCCGCATTCGGCGACAAGTCGCTGCCGAACCGCGTGAAGATTGGCCTGGCGGGCTTCGTCACACTGATCG
TCGCACCGACGATTGGTGCGCTGCCGTCGGCCACCGTGTTTTCCGCGCAGGGCATCTGGATCATCGTGAACCAGTTCCTG
ATCGGCGCGGCGCTGGGCTTCACGATGCAGATCGTGTTTGGCGCGGTGCAAGCTGCGGGCGACATCATCGGCATGAGCAT
GGGCCTCGGCTTCGCGACATTCTTCGACCCGCATGCGGCGGGTTCGACGGATGTGATGTCGCGCTATGTGTACATGATCG
CGATTCTGACTTTTCTTGCGCTGGATGGGCACCTGCAGGTGCTGTCGGCGTTGGTGCAGACGTTTCAGGCGCTGCCGGTG
TCCGCGAATGTGCTGGGGGCGAATGGCTGGCGCGTGCTGGTTGGATGGGGGAGCACTGTGGTCAGTGCTGGGCTGCTGTT
GTCTTTGCCCATTGTCACCGCGCTTTTGATTACCAACCTCGCGTTGGGGATTCTCAATCGGGCTGCGCCGCAGGTCGGGG
TGTTTCAGGTTGGATTGCCGGTTACTGTCATTACCGGGTTGCTTTTGATTCAGCTCATGCTGCCGAATATGATGCCCTTC
TTTGCTCGCGTGTTCGAGAGTGGGATCGATCAGATGGCTCGGGTGGCGGCCGGTTTAAAGTAA

Upstream 100 bases:

>100_bases
ATGCTTGCGAAGATGCTCGATTACATGCGCCACATGTTCACGAGCATTCCGACGCTCGCCGGCTGAGCGCCGTTCTCTTT
CCTTCTTCTTTCGACGCGCG

Downstream 100 bases:

>100_bases
GGTTCTTGCCTTCGTGGCGCGGGCTACGCCTTTAGTTTTCGGTCGGCGGTTTTGGGTTCGGTTTTGGGTTCGCTGGCATC
CGCGTTTTGCTTCCGGTTTG

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MFSVTYEQLNVWLTAFLWPFVRILALMATAPAFGDKSLPNRVKIGLAGFVTLIVAPTIGALPSATVFSAQGIWIIVNQFL
IGAALGFTMQIVFGAVQAAGDIIGMSMGLGFATFFDPHAAGSTDVMSRYVYMIAILTFLALDGHLQVLSALVQTFQALPV
SANVLGANGWRVLVGWGSTVVSAGLLLSLPIVTALLITNLALGILNRAAPQVGVFQVGLPVTVITGLLLIQLMLPNMMPF
FARVFESGIDQMARVAAGLK

Sequences:

>Translated_260_residues
MFSVTYEQLNVWLTAFLWPFVRILALMATAPAFGDKSLPNRVKIGLAGFVTLIVAPTIGALPSATVFSAQGIWIIVNQFL
IGAALGFTMQIVFGAVQAAGDIIGMSMGLGFATFFDPHAAGSTDVMSRYVYMIAILTFLALDGHLQVLSALVQTFQALPV
SANVLGANGWRVLVGWGSTVVSAGLLLSLPIVTALLITNLALGILNRAAPQVGVFQVGLPVTVITGLLLIQLMLPNMMPF
FARVFESGIDQMARVAAGLK
>Mature_260_residues
MFSVTYEQLNVWLTAFLWPFVRILALMATAPAFGDKSLPNRVKIGLAGFVTLIVAPTIGALPSATVFSAQGIWIIVNQFL
IGAALGFTMQIVFGAVQAAGDIIGMSMGLGFATFFDPHAAGSTDVMSRYVYMIAILTFLALDGHLQVLSALVQTFQALPV
SANVLGANGWRVLVGWGSTVVSAGLLLSLPIVTALLITNLALGILNRAAPQVGVFQVGLPVTVITGLLLIQLMLPNMMPF
FARVFESGIDQMARVAAGLK

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=259, Percent_Identity=44.015444015444, Blast_Score=186, Evalue=1e-48,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27482; Mature: 27482

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVTYEQLNVWLTAFLWPFVRILALMATAPAFGDKSLPNRVKIGLAGFVTLIVAPTIGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LPSATVFSAQGIWIIVNQFLIGAALGFTMQIVFGAVQAAGDIIGMSMGLGFATFFDPHAA
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
GSTDVMSRYVYMIAILTFLALDGHLQVLSALVQTFQALPVSANVLGANGWRVLVGWGSTV
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCHHH
VSAGLLLSLPIVTALLITNLALGILNRAAPQVGVFQVGLPVTVITGLLLIQLMLPNMMPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
FARVFESGIDQMARVAAGLK
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFSVTYEQLNVWLTAFLWPFVRILALMATAPAFGDKSLPNRVKIGLAGFVTLIVAPTIGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LPSATVFSAQGIWIIVNQFLIGAALGFTMQIVFGAVQAAGDIIGMSMGLGFATFFDPHAA
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
GSTDVMSRYVYMIAILTFLALDGHLQVLSALVQTFQALPVSANVLGANGWRVLVGWGSTV
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCHHH
VSAGLLLSLPIVTALLITNLALGILNRAAPQVGVFQVGLPVTVITGLLLIQLMLPNMMPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
FARVFESGIDQMARVAAGLK
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]