Click here to switch to the map view.

The map label for this gene is fliK [H]

Identifier: 186477683

GI number: 186477683

Start: 3292399

End: 3293910

Strand: Direct

Name: fliK [H]

Synonym: Bphy_2936

Alternate gene names: 186477683

Gene position: 3292399-3293910 (Clockwise)

Preceding gene: 186477682

Following gene: 186477684

Centisome position: 94.63

GC content: 70.04

Gene sequence:

>1512_bases
ATGTCGCCTCTTTCACTGATCAACTCGCTGCTCGCCGCTTCGAGCAGCACATCGGGCAGCAGCGCATCGAACGGCGCGAA
CGCCGGCAGCGCGCTGCCGTTTTCGACCACGCTGCAGCAAAGCATCAACGCACAGAACCTGGCCGCCGCGCCTGCGCCGT
CGCCCGCACCGAGCGCGCCGTCGCAGCCGGCATCGAACGGTTCGAGCGTGCACGACGCGCCGCCCGCCGACGATTCGTCC
AACAGCACCGATGCGTCCGACAGCTCGAACAGCACCGGCAGCACCCAGGCCGCGAGCCAGACCGACAGCACGCAGCCAGG
CAGCGCGGCGAACGGCGCGAATGGTGCGAGCGGCACGAATGGCAAGGACAAGGCCGATTCGGTTTCGAAGCAGAACGACG
CCGCGCCGACCACGAGCGCGGCCGCCGCTGAGACTGCCGCAGCCGCCGCAGCAGCAGCCGCCGCGGCTCAGGCACAAGCT
CAGGCGAGCGGCGCCACGGACGCAGCCAATGCAGCGAACGCGGCAACGCAACCGGCGATGCCTGCGTCGACCGACGTGGC
CGGCAATACAACGACGCCCGTGATTCAGACGCCGTCGAAGAAGATCGCATCGCTCGATCCGAAAGCCACCCAGGACGCAT
TGCAGGCCGCCTTCGCCGCATTGGCGAGCGGCCAGGGCGTGGCGCCCGCTGCGGGCGCAGCGACGTCCGCGAATGCGGGC
GCTGCCGCCACGGACGACGTAACGCTCGCTGGCCGCGGTGCTGGCTCAGGCAAGGGCCTGACCTTCGGTGACCTGCGCGC
CGCGAAGGGCGACGCAGCACCGGCGAACACTGCCTCAGCCGCCGCGCCCGCCACTGTGACAACCGCGCCCCTGAGCCCGG
CTGAAACGCTCGCCGCTGCCGCCGCCGGCTCGAATGCCGCGCAGGCAGCGCCCGTGCCCGCGGCGACCGCGGACACGAAC
GCCGCGCTCGCCGCGACTCAGGCCGCATCGGCGGCCGCCGCCGCGAGCGCGACTGCCACGCTCACTCAAGGCTCGAACCC
GGCAACGGCTGCGATGGCGAACGCCATCGCACCTCAAGTCGGCGCCCATGACTGGGAAGACGCCTTCAGCCAGAAAGTCG
TGTTCCTCACCAACGCGCATCAACAGACGGCAGAGCTCACGCTCAATCCGCGCGACCTCGGCCCTCTACAGGTCGTCCTC
CAGGTTGCCGATAACCATGCACATGCCCTTTTTGTTTCGCAGCATCAGCAGGTGCGCGACGCGGTCGAAGCCGCGCTGCC
GAAACTGCGCGAAGCGATGGAACAAGGCGGCATCGGGCTGGGAAGCGCGAGCGTCAGCGACGGCTTTGCCCGGCAGACCA
GCCAGCAGGGCCAGGACCAGAGCGGCAGCACGCGCAGCGGCCGTGGCGGCAGCCGCGGCAGCAACGAGGGCATCGACATC
GCAGGCGGCAGCGCGACGACAGTGAGCATGCCCGTGCGCCGCACGGTCGGACTCGTCGATACGTTCGCGTGA

Upstream 100 bases:

>100_bases
GCAAGAATTCTCCGGATGCGCGCAGAAGGCGCGTGAAGACGCAGCCCGCCGCATGAGATGCGGCGCGCAACGGGACTGAC
ACGACTACACGAGATCCACC

Downstream 100 bases:

>100_bases
TCCGATGCTGGGCGCATCGCCCCTCGGCGCGTTGTTGGCGTTGGCGCATCCGCTCCTTGCGGTGGTGTTTTTAGCGTTGC
CCTGCGGAGAAGGTCAGCAA

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MSPLSLINSLLAASSSTSGSSASNGANAGSALPFSTTLQQSINAQNLAAAPAPSPAPSAPSQPASNGSSVHDAPPADDSS
NSTDASDSSNSTGSTQAASQTDSTQPGSAANGANGASGTNGKDKADSVSKQNDAAPTTSAAAAETAAAAAAAAAAAQAQA
QASGATDAANAANAATQPAMPASTDVAGNTTTPVIQTPSKKIASLDPKATQDALQAAFAALASGQGVAPAAGAATSANAG
AAATDDVTLAGRGAGSGKGLTFGDLRAAKGDAAPANTASAAAPATVTTAPLSPAETLAAAAAGSNAAQAAPVPAATADTN
AALAATQAASAAAAASATATLTQGSNPATAAMANAIAPQVGAHDWEDAFSQKVVFLTNAHQQTAELTLNPRDLGPLQVVL
QVADNHAHALFVSQHQQVRDAVEAALPKLREAMEQGGIGLGSASVSDGFARQTSQQGQDQSGSTRSGRGGSRGSNEGIDI
AGGSATTVSMPVRRTVGLVDTFA

Sequences:

>Translated_503_residues
MSPLSLINSLLAASSSTSGSSASNGANAGSALPFSTTLQQSINAQNLAAAPAPSPAPSAPSQPASNGSSVHDAPPADDSS
NSTDASDSSNSTGSTQAASQTDSTQPGSAANGANGASGTNGKDKADSVSKQNDAAPTTSAAAAETAAAAAAAAAAAQAQA
QASGATDAANAANAATQPAMPASTDVAGNTTTPVIQTPSKKIASLDPKATQDALQAAFAALASGQGVAPAAGAATSANAG
AAATDDVTLAGRGAGSGKGLTFGDLRAAKGDAAPANTASAAAPATVTTAPLSPAETLAAAAAGSNAAQAAPVPAATADTN
AALAATQAASAAAAASATATLTQGSNPATAAMANAIAPQVGAHDWEDAFSQKVVFLTNAHQQTAELTLNPRDLGPLQVVL
QVADNHAHALFVSQHQQVRDAVEAALPKLREAMEQGGIGLGSASVSDGFARQTSQQGQDQSGSTRSGRGGSRGSNEGIDI
AGGSATTVSMPVRRTVGLVDTFA
>Mature_502_residues
SPLSLINSLLAASSSTSGSSASNGANAGSALPFSTTLQQSINAQNLAAAPAPSPAPSAPSQPASNGSSVHDAPPADDSSN
STDASDSSNSTGSTQAASQTDSTQPGSAANGANGASGTNGKDKADSVSKQNDAAPTTSAAAAETAAAAAAAAAAAQAQAQ
ASGATDAANAANAATQPAMPASTDVAGNTTTPVIQTPSKKIASLDPKATQDALQAAFAALASGQGVAPAAGAATSANAGA
AATDDVTLAGRGAGSGKGLTFGDLRAAKGDAAPANTASAAAPATVTTAPLSPAETLAAAAAGSNAAQAAPVPAATADTNA
ALAATQAASAAAAASATATLTQGSNPATAAMANAIAPQVGAHDWEDAFSQKVVFLTNAHQQTAELTLNPRDLGPLQVVLQ
VADNHAHALFVSQHQQVRDAVEAALPKLREAMEQGGIGLGSASVSDGFARQTSQQGQDQSGSTRSGRGGSRGSNEGIDIA
GGSATTVSMPVRRTVGLVDTFA

Specific function: Controls the length of the flagellar hook [H]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliK family [H]

Homologues:

Organism=Escherichia coli, GI1788253, Length=87, Percent_Identity=47.1264367816092, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001635
- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 48002; Mature: 47871

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLSLINSLLAASSSTSGSSASNGANAGSALPFSTTLQQSINAQNLAAAPAPSPAPSAP
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCC
SQPASNGSSVHDAPPADDSSNSTDASDSSNSTGSTQAASQTDSTQPGSAANGANGASGTN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKDKADSVSKQNDAAPTTSAAAAETAAAAAAAAAAAQAQAQASGATDAANAANAATQPAM
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
PASTDVAGNTTTPVIQTPSKKIASLDPKATQDALQAAFAALASGQGVAPAAGAATSANAG
CCCCCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
AAATDDVTLAGRGAGSGKGLTFGDLRAAKGDAAPANTASAAAPATVTTAPLSPAETLAAA
CCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHH
AAGSNAAQAAPVPAATADTNAALAATQAASAAAAASATATLTQGSNPATAAMANAIAPQV
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCC
GAHDWEDAFSQKVVFLTNAHQQTAELTLNPRDLGPLQVVLQVADNHAHALFVSQHQQVRD
CCCCHHHHHCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHH
AVEAALPKLREAMEQGGIGLGSASVSDGFARQTSQQGQDQSGSTRSGRGGSRGSNEGIDI
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
AGGSATTVSMPVRRTVGLVDTFA
ECCCCEEEECCHHHHHHHHHHCC
>Mature Secondary Structure 
SPLSLINSLLAASSSTSGSSASNGANAGSALPFSTTLQQSINAQNLAAAPAPSPAPSAP
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCC
SQPASNGSSVHDAPPADDSSNSTDASDSSNSTGSTQAASQTDSTQPGSAANGANGASGTN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GKDKADSVSKQNDAAPTTSAAAAETAAAAAAAAAAAQAQAQASGATDAANAANAATQPAM
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
PASTDVAGNTTTPVIQTPSKKIASLDPKATQDALQAAFAALASGQGVAPAAGAATSANAG
CCCCCCCCCCCCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
AAATDDVTLAGRGAGSGKGLTFGDLRAAKGDAAPANTASAAAPATVTTAPLSPAETLAAA
CCCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHH
AAGSNAAQAAPVPAATADTNAALAATQAASAAAAASATATLTQGSNPATAAMANAIAPQV
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCC
GAHDWEDAFSQKVVFLTNAHQQTAELTLNPRDLGPLQVVLQVADNHAHALFVSQHQQVRD
CCCCHHHHHCCEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHH
AVEAALPKLREAMEQGGIGLGSASVSDGFARQTSQQGQDQSGSTRSGRGGSRGSNEGIDI
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
AGGSATTVSMPVRRTVGLVDTFA
ECCCCEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8631687; 9097040; 9278503 [H]