| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is fliI [H]
Identifier: 186477681
GI number: 186477681
Start: 3290226
End: 3291869
Strand: Direct
Name: fliI [H]
Synonym: Bphy_2934
Alternate gene names: 186477681
Gene position: 3290226-3291869 (Clockwise)
Preceding gene: 186477680
Following gene: 186477682
Centisome position: 94.57
GC content: 67.88
Gene sequence:
>1644_bases ATGGTAAAGCCGACCATCGAAGACATTCAGCATAGCGACCTCACGCCGCTCGAACGCGAGCTGGCGCTGGCGTCGTTCGG CGCGGAAGCGCTCACCGTCGCACAGATGGAAGAGTCGCTCGCGGCGCTGGAATCCGCGATTTCGGAAGCCCATGCGGGCG CCAGCGACGAGCGTTCGCACGAAAAGCCTGCGAGCGCGCCGCATCCCGAAGCGGCGCCCGCGAGCCGCGACTCGGCGCCC CCGCCGAAGCGCGCACCCGATCCCGCACTGCTCGACAACCCGCATTTGCAGGCATGGCGCAACCGCCTCACGAGCCTGCG CGAACGCAACCAGATCGCGCGCCCGCTGCGCGCGTGCGGCCGCCTGACGCGTGCGGCCGGTCTCGTGCTTGAAGCCGTCG GGCTGCGTCTCGCCGTCGGCTCCGAAGTGATGATCGAGCTGCCGCCCGGCAGCACGCGCACGATGGCGGAAGCCGAAGTG GTCGGCTTTCACGGCGACAAGCTCTTTCTGATGCCGACGACGGAAGTCGCCGGTCTCCTGCCCGGCGCGCGTGTCTATCC GCTGGAGACGGCGCCCATCGCCGATCCGATGGCGGGCGCGAAGCGTCTGCCCGTCGGCTGGGAACTGCTCGGCCGCGTGG TCGATGCATCGGGCAAGCCGCTCGACGGCTTCGGCCCGCTCAATTCGCGCAACGACGCGCCGCTCACTGCGCCGACCATC AACCCGCTGCATCGCGAGCCGATTCACAAGGTGCTCGACGTCGGCGTGCGCGCGATCAACTCGCTGCTCACCGTCGGACG CGGTCAGCGCATGGGTCTGTTCGCGGGATCGGGCGTCGGTAAATCGGTGCTGCTCGGCACGATGGCGCGCTATACGAGCG CCGAAGTGATCGTGATCGGGCTGATAGGCGAGCGCGGCCGCGAAGTGAAGGAATTCATCGAACAGATTCTCGGCGAGGAA GGTCTCGCGCGCTCGGTCGTGGTGGCCGCGCCCGCCGACGTGTCGCCGCTGCTGCGGATGCAGGGCGCCGCCTACGCGAC GTCGCTCGCCGAATATTTCCGCGATCAGGGCAAGCACGTGCTGCTGCTGATGGACTCGCTCACGCGCTACGCGATGGCGC AGCGCGAGATCGCGCTCGCGATCGGCGAGCCGCCCGCGACCAAGGGCTATCCGCCTTCCGTGTTCGCGAAGCTGCCTGCC CTCGTCGAGCGCACGGGCAACGGCCCCGAAGGCGGCGGCTCGATCACTGCGTTCTATACGGTGCTGACGGAAGGCGACGA CCAGCAGGACCCGATCGCAGACTCGGCGCGCGCCATTCTCGACGGCCATATCGTGCTGTCGCGCGCGCTCGCCGAAGCGG GCCACTACCCCGCCATCGACATCGAAGCGTCGATCAGCCGCGCGATGACGGCGCTTATCAGCGACGCTCATCTGGATCGC ACGCGCCAGTTCAAGCAGATGCTGTCGCGCTATCAGCGCAACCGCGACCTGATCAACGTCGGCGCGTATTCGGCGGGACG CGACGCGGTGCTCGACAAGGCGATCGCGTTGTATCCGCGCATGGAAGCATTCCTGCAGCAAGGTTTTCGCGAAAGCGCCG GGTTCGAAGCCAGCGTGGCGCACCTCGACTCGTTGTTCGGCTAG
Upstream 100 bases:
>100_bases AACGCGGCGGCTGCCGCGCCGTGTCCACGACGGGCGAAGTGGACGCCGGCATCGCGACGCGCTGGGAGCGCGTCACGGCA GCGCTCGGCAAGGCAAGCAC
Downstream 100 bases:
>100_bases GAGTAACAGACGCTTATGAGCAAGCACTTCCCGATCAAAACGCTGATTGGCCTCGCACAGGACGACGTTGACGCCGCCGC GCGCAAGCTAGGCCGCGTCC
Product: FliI/YscN family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MVKPTIEDIQHSDLTPLERELALASFGAEALTVAQMEESLAALESAISEAHAGASDERSHEKPASAPHPEAAPASRDSAP PPKRAPDPALLDNPHLQAWRNRLTSLRERNQIARPLRACGRLTRAAGLVLEAVGLRLAVGSEVMIELPPGSTRTMAEAEV VGFHGDKLFLMPTTEVAGLLPGARVYPLETAPIADPMAGAKRLPVGWELLGRVVDASGKPLDGFGPLNSRNDAPLTAPTI NPLHREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEE GLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPA LVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALISDAHLDR TRQFKQMLSRYQRNRDLINVGAYSAGRDAVLDKAIALYPRMEAFLQQGFRESAGFEASVAHLDSLFG
Sequences:
>Translated_547_residues MVKPTIEDIQHSDLTPLERELALASFGAEALTVAQMEESLAALESAISEAHAGASDERSHEKPASAPHPEAAPASRDSAP PPKRAPDPALLDNPHLQAWRNRLTSLRERNQIARPLRACGRLTRAAGLVLEAVGLRLAVGSEVMIELPPGSTRTMAEAEV VGFHGDKLFLMPTTEVAGLLPGARVYPLETAPIADPMAGAKRLPVGWELLGRVVDASGKPLDGFGPLNSRNDAPLTAPTI NPLHREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEE GLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPA LVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALISDAHLDR TRQFKQMLSRYQRNRDLINVGAYSAGRDAVLDKAIALYPRMEAFLQQGFRESAGFEASVAHLDSLFG >Mature_547_residues MVKPTIEDIQHSDLTPLERELALASFGAEALTVAQMEESLAALESAISEAHAGASDERSHEKPASAPHPEAAPASRDSAP PPKRAPDPALLDNPHLQAWRNRLTSLRERNQIARPLRACGRLTRAAGLVLEAVGLRLAVGSEVMIELPPGSTRTMAEAEV VGFHGDKLFLMPTTEVAGLLPGARVYPLETAPIADPMAGAKRLPVGWELLGRVVDASGKPLDGFGPLNSRNDAPLTAPTI NPLHREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEE GLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPA LVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALISDAHLDR TRQFKQMLSRYQRNRDLINVGAYSAGRDAVLDKAIALYPRMEAFLQQGFRESAGFEASVAHLDSLFG
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum. May be involved in a specialized protein export pathway that proceeds without signal peptide cleavage [
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=357, Percent_Identity=29.6918767507003, Blast_Score=153, Evalue=5e-37, Organism=Homo sapiens, GI50345984, Length=354, Percent_Identity=32.2033898305085, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI4757810, Length=354, Percent_Identity=32.2033898305085, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI19913424, Length=248, Percent_Identity=30.6451612903226, Blast_Score=112, Evalue=7e-25, Organism=Homo sapiens, GI19913428, Length=304, Percent_Identity=27.3026315789474, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI19913426, Length=291, Percent_Identity=27.8350515463918, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1788251, Length=431, Percent_Identity=72.1577726218097, Blast_Score=585, Evalue=1e-168, Organism=Escherichia coli, GI1790170, Length=352, Percent_Identity=30.3977272727273, Blast_Score=150, Evalue=2e-37, Organism=Escherichia coli, GI1790172, Length=299, Percent_Identity=29.0969899665552, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1790217, Length=275, Percent_Identity=26.5454545454545, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25144756, Length=372, Percent_Identity=29.0322580645161, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI71988080, Length=353, Percent_Identity=31.1614730878187, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71988063, Length=353, Percent_Identity=31.1614730878187, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71988074, Length=435, Percent_Identity=28.5057471264368, Blast_Score=124, Evalue=9e-29, Organism=Caenorhabditis elegans, GI17510931, Length=312, Percent_Identity=27.2435897435897, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17570191, Length=312, Percent_Identity=27.2435897435897, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17565854, Length=235, Percent_Identity=32.3404255319149, Blast_Score=110, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6319370, Length=339, Percent_Identity=31.858407079646, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6322581, Length=313, Percent_Identity=30.9904153354633, Blast_Score=148, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6319603, Length=313, Percent_Identity=28.1150159744409, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6320016, Length=258, Percent_Identity=29.4573643410853, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI24638766, Length=356, Percent_Identity=29.4943820224719, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24658560, Length=367, Percent_Identity=30.7901907356948, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI28574560, Length=356, Percent_Identity=29.4943820224719, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI281361666, Length=315, Percent_Identity=26.984126984127, Blast_Score=114, Evalue=3e-25, Organism=Drosophila melanogaster, GI24646341, Length=315, Percent_Identity=26.984126984127, Blast_Score=114, Evalue=3e-25, Organism=Drosophila melanogaster, GI17136796, Length=315, Percent_Identity=26.984126984127, Blast_Score=114, Evalue=3e-25, Organism=Drosophila melanogaster, GI24583992, Length=249, Percent_Identity=30.1204819277108, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24583988, Length=249, Percent_Identity=30.1204819277108, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24583986, Length=249, Percent_Identity=30.1204819277108, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24583984, Length=249, Percent_Identity=30.1204819277108, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI20129479, Length=240, Percent_Identity=29.1666666666667, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR005714 - InterPro: IPR020005 [H]
Pfam domain/function: PF00006 ATP-synt_ab [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 58418; Mature: 58418
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKPTIEDIQHSDLTPLERELALASFGAEALTVAQMEESLAALESAISEAHAGASDERSH CCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EKPASAPHPEAAPASRDSAPPPKRAPDPALLDNPHLQAWRNRLTSLRERNQIARPLRACG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLTRAAGLVLEAVGLRLAVGSEVMIELPPGSTRTMAEAEVVGFHGDKLFLMPTTEVAGLL HHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCCHHHHEEEEECCCEEEEEECHHHHHCC PGARVYPLETAPIADPMAGAKRLPVGWELLGRVVDASGKPLDGFGPLNSRNDAPLTAPTI CCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC NPLHREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE LIGERGREVKEFIEQILGEEGLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHV ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCEE LLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYT EEEHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE VLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALISDAHLDR EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH TRQFKQMLSRYQRNRDLINVGAYSAGRDAVLDKAIALYPRMEAFLQQGFRESAGFEASVA HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HLDSLFG HHHHHCC >Mature Secondary Structure MVKPTIEDIQHSDLTPLERELALASFGAEALTVAQMEESLAALESAISEAHAGASDERSH CCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EKPASAPHPEAAPASRDSAPPPKRAPDPALLDNPHLQAWRNRLTSLRERNQIARPLRACG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RLTRAAGLVLEAVGLRLAVGSEVMIELPPGSTRTMAEAEVVGFHGDKLFLMPTTEVAGLL HHHHHHHHHHHHHHHHEEECCEEEEECCCCCCCCHHHHEEEEECCCEEEEEECHHHHHCC PGARVYPLETAPIADPMAGAKRLPVGWELLGRVVDASGKPLDGFGPLNSRNDAPLTAPTI CCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC NPLHREPIHKVLDVGVRAINSLLTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEE LIGERGREVKEFIEQILGEEGLARSVVVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHV ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHCCCEE LLLMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYT EEEHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE VLTEGDDQQDPIADSARAILDGHIVLSRALAEAGHYPAIDIEASISRAMTALISDAHLDR EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHH TRQFKQMLSRYQRNRDLINVGAYSAGRDAVLDKAIALYPRMEAFLQQGFRESAGFEASVA HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH HLDSLFG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]