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The map label for this gene is fliF [H]

Identifier: 186477678

GI number: 186477678

Start: 3286802

End: 3288583

Strand: Direct

Name: fliF [H]

Synonym: Bphy_2931

Alternate gene names: 186477678

Gene position: 3286802-3288583 (Clockwise)

Preceding gene: 186477672

Following gene: 186477679

Centisome position: 94.47

GC content: 66.39

Gene sequence:

>1782_bases
ATGGATTCGTCAGCCAACTCTTTAATGACCCCCGACGCCCGCATGGGCCTCGCCGGCGCGCAGCCGGGCGCAGCGGGAGC
CGGCCAGGGCGCCGCGGGCCTGGACCTCGGCGGCGCGGGCAGCGGCCTTGCCTCGCGCTTTCCGGGGCTTCCCACGTCGT
TGACGCAGATGCGCGGCAATCCTCGCGCGCCGCTCATCTTCGCCGTCGCGGTGCTGATCGCCGTGGTCGCGGGTCTGGTT
CTCTGGTCGCGTGCGCCCGACTACAAGGTGCTGTACAGCAACGTCTCCGATCAGGACGGCGGCGCAATCGTTGCCGCGCT
CCAGCAGGCGAACGTGCCGTACAAGTTTTCCGAAGCGGGCGGCGCCATCCTGATCCCCGCTGACCAGGTGCACGAAATGC
GTCTGCGCCTCGCGTCGCAGGGTCTGCCCAAGAGCGGCTCGGTCGGCTTCGAACTGATGGACAACCAGAAGTTCGGCATC
AGCCAGTTCGCCGAGCAGATCAACTATCAGCGCGCGCTGGAAGGCGAACTGCAGCGCACGATCGAATCCATCTCGACGGT
GAAGACGGCGCGCGTCCATCTGGCGATTCCGAAGCCCACGGTGTTCGTGCGCGACCGCGAAGCGCCGTCGGCGTCCGTGC
TCGTCAATCTGTATCCGGGCCGCATGCTCGACGAAGGCCAGGTCGTGGCCATCACGCATATGGTCGCGTCCGCCGTGCCC
GACATGTCCGTACGCGGCGTGACGATCGTCGACCAGGACGGCAACCTCCTCACGCAGGCGGGCGCCAATGGCGCCGGGCT
CGATGCGACGCAACTCAAGTATCGGCAGCAGATCGAGCGCAACACGCAGCAGCGCATCGACGCGATCCTCGGACCGATGT
TCGGGACAGGCAACGCGCATTCGTCGGTGAGCGCGGACATCGACTTCTCCCGGCAAGAGCTGACCTCGGAGAAATATGCG
CCGAACAACGACCCGCAGCAGGCGGCCATTCGCAGCCAGCAGACCAGCACGGCCACCGAAATGTCGCAAAGCGGCGCCTC
GGGCGTGCCGGGCGCGCTGTCGAACCAGCCGCCGCAGCCGGCCTCGGCGCCCATCACGGCGAGCGCGAACGGCGCAAGCG
GCGTGACGACTACACCGATCAGCGACCATAAGGACTCGACCACCAACTACGAGTTGAGCAAGACCGTGAGCCACACGGAA
GCGGCCGTTGGCGGCATCAAGCGCCTGTCGGTAGCCGTGGTGGTGAACTACATGCGCGTCTTCGATGCGAAGGGCCACGC
GACCATGCAGCCCATTTCCGCCGACAAGCTCGCGCAGGTCGATCAGCTGGTCAAGGAAGCGATGGGCTACGACCAGGCGC
GCGGCGACACGGTCAAGGTGATCAGCAGCGCGTTCCAGCAGATCGCAGATCCGGATGCCGACCTGCCGTGGTGGCGCACG
AAGGACATGATCGCGATGTACAAGCAGATCGCGACCTACCTGGGCATCGGCCTCGTCGCACTGTTCCTGTACTTCGTGAT
GGTGAAGCCGGCGCTGCGCCGTGCGTTCCCGCCGCCGCCCGAGGCCGTGGCCGCGCTGCCGTCGCCCGACGAACCCGTGC
TCGACGGCCTGCCGACCGCGGCAGCCGTGGCAGCCGAAGAGGATGTCGAGGGCAGCCTCGTCGCACTCGAGAGCGACAAG
GCCAAATATGAGCGGAACCTCGAATATGCGCGTCAGATCGCGCGTCAGGATCCGAAGATCGTTGCAACCGTCGTGAAGAG
CTGGGTGTCCGATGAGCACTGA

Upstream 100 bases:

>100_bases
ATGCGGATAATCCCTAACGTGAAAGTCTCTGTCGACAGACGCCAGCTGGTAAGGCGCCGTAAGCGGCGGAACGCAAAAGG
ATTCCGGAGAAACCCGACGC

Downstream 100 bases:

>100_bases
AGGCGTATTGAAGAGCGCGCTCCTGCTGATGTCGATCGGCGAGGAAGAGGCGGCTCAGGTATTCAAGTTTCTGGGCCCGC
GCGAAGTCCAGAAGATCGGC

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MDSSANSLMTPDARMGLAGAQPGAAGAGQGAAGLDLGGAGSGLASRFPGLPTSLTQMRGNPRAPLIFAVAVLIAVVAGLV
LWSRAPDYKVLYSNVSDQDGGAIVAALQQANVPYKFSEAGGAILIPADQVHEMRLRLASQGLPKSGSVGFELMDNQKFGI
SQFAEQINYQRALEGELQRTIESISTVKTARVHLAIPKPTVFVRDREAPSASVLVNLYPGRMLDEGQVVAITHMVASAVP
DMSVRGVTIVDQDGNLLTQAGANGAGLDATQLKYRQQIERNTQQRIDAILGPMFGTGNAHSSVSADIDFSRQELTSEKYA
PNNDPQQAAIRSQQTSTATEMSQSGASGVPGALSNQPPQPASAPITASANGASGVTTTPISDHKDSTTNYELSKTVSHTE
AAVGGIKRLSVAVVVNYMRVFDAKGHATMQPISADKLAQVDQLVKEAMGYDQARGDTVKVISSAFQQIADPDADLPWWRT
KDMIAMYKQIATYLGIGLVALFLYFVMVKPALRRAFPPPPEAVAALPSPDEPVLDGLPTAAAVAAEEDVEGSLVALESDK
AKYERNLEYARQIARQDPKIVATVVKSWVSDEH

Sequences:

>Translated_593_residues
MDSSANSLMTPDARMGLAGAQPGAAGAGQGAAGLDLGGAGSGLASRFPGLPTSLTQMRGNPRAPLIFAVAVLIAVVAGLV
LWSRAPDYKVLYSNVSDQDGGAIVAALQQANVPYKFSEAGGAILIPADQVHEMRLRLASQGLPKSGSVGFELMDNQKFGI
SQFAEQINYQRALEGELQRTIESISTVKTARVHLAIPKPTVFVRDREAPSASVLVNLYPGRMLDEGQVVAITHMVASAVP
DMSVRGVTIVDQDGNLLTQAGANGAGLDATQLKYRQQIERNTQQRIDAILGPMFGTGNAHSSVSADIDFSRQELTSEKYA
PNNDPQQAAIRSQQTSTATEMSQSGASGVPGALSNQPPQPASAPITASANGASGVTTTPISDHKDSTTNYELSKTVSHTE
AAVGGIKRLSVAVVVNYMRVFDAKGHATMQPISADKLAQVDQLVKEAMGYDQARGDTVKVISSAFQQIADPDADLPWWRT
KDMIAMYKQIATYLGIGLVALFLYFVMVKPALRRAFPPPPEAVAALPSPDEPVLDGLPTAAAVAAEEDVEGSLVALESDK
AKYERNLEYARQIARQDPKIVATVVKSWVSDEH
>Mature_593_residues
MDSSANSLMTPDARMGLAGAQPGAAGAGQGAAGLDLGGAGSGLASRFPGLPTSLTQMRGNPRAPLIFAVAVLIAVVAGLV
LWSRAPDYKVLYSNVSDQDGGAIVAALQQANVPYKFSEAGGAILIPADQVHEMRLRLASQGLPKSGSVGFELMDNQKFGI
SQFAEQINYQRALEGELQRTIESISTVKTARVHLAIPKPTVFVRDREAPSASVLVNLYPGRMLDEGQVVAITHMVASAVP
DMSVRGVTIVDQDGNLLTQAGANGAGLDATQLKYRQQIERNTQQRIDAILGPMFGTGNAHSSVSADIDFSRQELTSEKYA
PNNDPQQAAIRSQQTSTATEMSQSGASGVPGALSNQPPQPASAPITASANGASGVTTTPISDHKDSTTNYELSKTVSHTE
AAVGGIKRLSVAVVVNYMRVFDAKGHATMQPISADKLAQVDQLVKEAMGYDQARGDTVKVISSAFQQIADPDADLPWWRT
KDMIAMYKQIATYLGIGLVALFLYFVMVKPALRRAFPPPPEAVAALPSPDEPVLDGLPTAAAVAAEEDVEGSLVALESDK
AKYERNLEYARQIARQDPKIVATVVKSWVSDEH

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=560, Percent_Identity=45.7142857142857, Blast_Score=476, Evalue=1e-135,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 62745; Mature: 62745

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSANSLMTPDARMGLAGAQPGAAGAGQGAAGLDLGGAGSGLASRFPGLPTSLTQMRGN
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCC
PRAPLIFAVAVLIAVVAGLVLWSRAPDYKVLYSNVSDQDGGAIVAALQQANVPYKFSEAG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEHHHHCCCCEEECCCC
GAILIPADQVHEMRLRLASQGLPKSGSVGFELMDNQKFGISQFAEQINYQRALEGELQRT
CEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IESISTVKTARVHLAIPKPTVFVRDREAPSASVLVNLYPGRMLDEGQVVAITHMVASAVP
HHHHHHHHEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHCC
DMSVRGVTIVDQDGNLLTQAGANGAGLDATQLKYRQQIERNTQQRIDAILGPMFGTGNAH
CCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSVSADIDFSRQELTSEKYAPNNDPQQAAIRSQQTSTATEMSQSGASGVPGALSNQPPQP
CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASAPITASANGASGVTTTPISDHKDSTTNYELSKTVSHTEAAVGGIKRLSVAVVVNYMRV
CCCCEEECCCCCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDAKGHATMQPISADKLAQVDQLVKEAMGYDQARGDTVKVISSAFQQIADPDADLPWWRT
HCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
KDMIAMYKQIATYLGIGLVALFLYFVMVKPALRRAFPPPPEAVAALPSPDEPVLDGLPTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHCCCCCH
AAVAAEEDVEGSLVALESDKAKYERNLEYARQIARQDPKIVATVVKSWVSDEH
HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSSANSLMTPDARMGLAGAQPGAAGAGQGAAGLDLGGAGSGLASRFPGLPTSLTQMRGN
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHCCC
PRAPLIFAVAVLIAVVAGLVLWSRAPDYKVLYSNVSDQDGGAIVAALQQANVPYKFSEAG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEHHHHCCCCEEECCCC
GAILIPADQVHEMRLRLASQGLPKSGSVGFELMDNQKFGISQFAEQINYQRALEGELQRT
CEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IESISTVKTARVHLAIPKPTVFVRDREAPSASVLVNLYPGRMLDEGQVVAITHMVASAVP
HHHHHHHHEEEEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCCCCEEEHHHHHHHHCC
DMSVRGVTIVDQDGNLLTQAGANGAGLDATQLKYRQQIERNTQQRIDAILGPMFGTGNAH
CCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SSVSADIDFSRQELTSEKYAPNNDPQQAAIRSQQTSTATEMSQSGASGVPGALSNQPPQP
CCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASAPITASANGASGVTTTPISDHKDSTTNYELSKTVSHTEAAVGGIKRLSVAVVVNYMRV
CCCCEEECCCCCCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDAKGHATMQPISADKLAQVDQLVKEAMGYDQARGDTVKVISSAFQQIADPDADLPWWRT
HCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
KDMIAMYKQIATYLGIGLVALFLYFVMVKPALRRAFPPPPEAVAALPSPDEPVLDGLPTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHCCCCCH
AAVAAEEDVEGSLVALESDKAKYERNLEYARQIARQDPKIVATVVKSWVSDEH
HHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 1551848; 8224881 [H]