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The map label for this gene is ybjT [C]

Identifier: 186477647

GI number: 186477647

Start: 3253383

End: 3254339

Strand: Reverse

Name: ybjT [C]

Synonym: Bphy_2899

Alternate gene names: 186477647

Gene position: 3254339-3253383 (Counterclockwise)

Preceding gene: 186477648

Following gene: 186477646

Centisome position: 93.54

GC content: 63.53

Gene sequence:

>957_bases
ATGCGACATCAAACCATCGCGGTCATCGGCGGTTCCGGTTTTATCGGCAGTCATCTCGTCAACGCGCTCGTCGAAATCGG
CAAGACGGTGCGCATCGCCACCCGCCGCCGCTATAACGCGCGGCATCTCACGCTGCTTCCCATCGACGTGGTGGAAACCG
ACGTGTTCGATCCCATTCAGCTCGCGCGTTTCGTCGAGGGCGCGGACGCCGTGGTCAATCTGGTCGGCGTGCTGCACGGC
CGTCGCGGCGATCCGTATGGACCCGAGTTCGCGAAAGCGCACGTCGAATTGCCAACCAGGATCGTCTCCGCCTGCGAAGG
CAAGAGCGTGCACCGGCTGATCCACGTCAGCGCGATCGGCGCCGACCCGCGTGGGCCGAGCATGTATCTGCGCTCGAAGG
GCGATGGCGAGCGCGCGATTCACGCATCGTCGATGCTGGCGTCGACGATCTTTCGTCCCTCGGTTGTGTTCGGTCCCGAA
GACCAGTTCCTCAACAAGTTCGCGTTCCTGCAGCGCATGTTTCCCGTCATCCCGCTCGCCAAGGCCGGCGCGCGCTTTCA
ACCGATCTTTGTCGGCGATGTCGCGAAGGCAATCGTGAACGTGCTGGACCTCGACGCCTCGACGGGGCGCACGTATGAGC
TGGGCGGTCCTTCCGTCTACACGCTCGAAGCACTCGTCGAATATTGCGGCGACGTAATCGGCAAGCATGCGCGCATCGTG
CGGCTGCCCGATTCGCTGGCGCGTCTGCAGGCGCTGTCATTCGAACTCGCGCCCGGGGAGCCGGTACTGTCGCGCGACAA
TCTCGACTCGATGAAGATCGATGCCGTACTGAGCGCACCCCTCGCGCCCGAACTCGATATTGAGCCCGCCAGCATCGAAA
CCATCGCACCCGTATACCTGACGGGCTCGTCGTTCCGTTCGCGCTTCAATGCGTTCCGCGCGAGCGCGGGCCGTTAA

Upstream 100 bases:

>100_bases
TGCAGTAACGATGCGCCATGCCGCCGCCGCGTGACCCGTCACGCAAGCGGCGGCGCTCGAACCTCAGCCGTTGCCGCGGC
TTCCATCAGGGAGTCGAAAA

Downstream 100 bases:

>100_bases
ACTGTGCCGTTCAACCCACTCTATCGCGAAGCATGAAACTCATTATCGGCGACAAGAACTATTCGTCCTGGTCAATGCGG
CCTTGGCTCGTACTCAAGCA

Product: NADH dehydrogenase

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdp-Glucose-46-Dehydratase; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Oxidoreductase Protein; Epimerase; Male Sterility-Like Protein; NDP-Sugar Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerases; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Acyl-CoA Synthetase; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; DTDP-Glucose-46-Dehydratase; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRHQTIAVIGGSGFIGSHLVNALVEIGKTVRIATRRRYNARHLTLLPIDVVETDVFDPIQLARFVEGADAVVNLVGVLHG
RRGDPYGPEFAKAHVELPTRIVSACEGKSVHRLIHVSAIGADPRGPSMYLRSKGDGERAIHASSMLASTIFRPSVVFGPE
DQFLNKFAFLQRMFPVIPLAKAGARFQPIFVGDVAKAIVNVLDLDASTGRTYELGGPSVYTLEALVEYCGDVIGKHARIV
RLPDSLARLQALSFELAPGEPVLSRDNLDSMKIDAVLSAPLAPELDIEPASIETIAPVYLTGSSFRSRFNAFRASAGR

Sequences:

>Translated_318_residues
MRHQTIAVIGGSGFIGSHLVNALVEIGKTVRIATRRRYNARHLTLLPIDVVETDVFDPIQLARFVEGADAVVNLVGVLHG
RRGDPYGPEFAKAHVELPTRIVSACEGKSVHRLIHVSAIGADPRGPSMYLRSKGDGERAIHASSMLASTIFRPSVVFGPE
DQFLNKFAFLQRMFPVIPLAKAGARFQPIFVGDVAKAIVNVLDLDASTGRTYELGGPSVYTLEALVEYCGDVIGKHARIV
RLPDSLARLQALSFELAPGEPVLSRDNLDSMKIDAVLSAPLAPELDIEPASIETIAPVYLTGSSFRSRFNAFRASAGR
>Mature_318_residues
MRHQTIAVIGGSGFIGSHLVNALVEIGKTVRIATRRRYNARHLTLLPIDVVETDVFDPIQLARFVEGADAVVNLVGVLHG
RRGDPYGPEFAKAHVELPTRIVSACEGKSVHRLIHVSAIGADPRGPSMYLRSKGDGERAIHASSMLASTIFRPSVVFGPE
DQFLNKFAFLQRMFPVIPLAKAGARFQPIFVGDVAKAIVNVLDLDASTGRTYELGGPSVYTLEALVEYCGDVIGKHARIV
RLPDSLARLQALSFELAPGEPVLSRDNLDSMKIDAVLSAPLAPELDIEPASIETIAPVYLTGSSFRSRFNAFRASAGR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=287, Percent_Identity=33.4494773519164, Blast_Score=136, Evalue=3e-32,
Organism=Escherichia coli, GI87081793, Length=241, Percent_Identity=26.1410788381743, Blast_Score=65, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17556106, Length=240, Percent_Identity=29.1666666666667, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24667554, Length=280, Percent_Identity=30, Blast_Score=98, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34404; Mature: 34404

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHQTIAVIGGSGFIGSHLVNALVEIGKTVRIATRRRYNARHLTLLPIDVVETDVFDPIQ
CCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCEEEEEEEHHHHCCCCCHHH
LARFVEGADAVVNLVGVLHGRRGDPYGPEFAKAHVELPTRIVSACEGKSVHRLIHVSAIG
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
ADPRGPSMYLRSKGDGERAIHASSMLASTIFRPSVVFGPEDQFLNKFAFLQRMFPVIPLA
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCHH
KAGARFQPIFVGDVAKAIVNVLDLDASTGRTYELGGPSVYTLEALVEYCGDVIGKHARIV
HCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEE
RLPDSLARLQALSFELAPGEPVLSRDNLDSMKIDAVLSAPLAPELDIEPASIETIAPVYL
ECCHHHHHHHHHHEEECCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCEEEEEEE
TGSSFRSRFNAFRASAGR
ECHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRHQTIAVIGGSGFIGSHLVNALVEIGKTVRIATRRRYNARHLTLLPIDVVETDVFDPIQ
CCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCEEEEEEEHHHHCCCCCHHH
LARFVEGADAVVNLVGVLHGRRGDPYGPEFAKAHVELPTRIVSACEGKSVHRLIHVSAIG
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
ADPRGPSMYLRSKGDGERAIHASSMLASTIFRPSVVFGPEDQFLNKFAFLQRMFPVIPLA
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCHH
KAGARFQPIFVGDVAKAIVNVLDLDASTGRTYELGGPSVYTLEALVEYCGDVIGKHARIV
HCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEE
RLPDSLARLQALSFELAPGEPVLSRDNLDSMKIDAVLSAPLAPELDIEPASIETIAPVYL
ECCHHHHHHHHHHEEECCCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCEEEEEEE
TGSSFRSRFNAFRASAGR
ECHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA