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The map label for this gene is rcsB [H]

Identifier: 186477620

GI number: 186477620

Start: 3227172

End: 3227879

Strand: Reverse

Name: rcsB [H]

Synonym: Bphy_2872

Alternate gene names: 186477620

Gene position: 3227879-3227172 (Counterclockwise)

Preceding gene: 186477624

Following gene: 186477618

Centisome position: 92.78

GC content: 54.38

Gene sequence:

>708_bases
ATGCAAGATCCCATCAGGGTCGTGGTCGCCGATGACCATCCAGTAATTCTCTTTGGCGCAGAACAGGCGTTGCTCAAGTT
CCAGGGCATCCGCGTGGTCGCGCGCGCAAGGCAGTCCACAGAGCTGGTGAAGATATTGCAGACGACCCCATGCGATGTGC
TCGTCACCGATCTCGCCATGCCAGGCGGACAATACGGTGACGGCCTACCGTTGATCGGCTATTTGCGTCGGAATTTTCCT
GACTTGCCCATAGTCGTCCTGACGATGCTCGAAAACGCCGCGTTATTGAAGCGTCTGAGCGAGCTTGGCGTGATCTCGGT
CGTCAACAAGTCGGACGATCTGAGTCATATCGGCCTTGCAGTGCAGCATGTCAGCCGGCACATCGAATATATGAGTCCGT
CGGTAAAGTCGGCGCTCGATACATTGCGCATGAATACGGGCGGTAAGAACGACGAAGTGATTCTTTCGAAACGTGAACTC
GAGGTGGTTCGTCTATTTGTGTCCGGCATGACGATCAAGGAAATTTCCGAACAGCTGAATCGCAGCATTAAGACGATCAG
TACGCAAAAGAATACTGCCATGCGCAAACTCGGGCTCGAACGGGACTCCGAACTATTTCAGTATGCGCAGAGTAACGGCT
TGATGAACCTGTCTTCGTATGCGCCGGGTGCAGCAGATACGGGCACGGGGCCGACGGAAGAACGTTAG

Upstream 100 bases:

>100_bases
CCGCAGTTGTAAGCAAGCAGACAAGTCCGAGAAATTTAGAACTAAGAACAGTTGCATGACTGAAGTTTCGGAGCGTGGAT
TGTCAGTTGAAGGAAGGGCC

Downstream 100 bases:

>100_bases
GCGTCGACAGGACAGTGACCATCAGACGCCGAAAGCTTAAGGTGCATACGCAATAAAAAACGCCGCCTGTCTTCAAGACA
GGCGGCGTTTTCGTATGCAG

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MQDPIRVVVADDHPVILFGAEQALLKFQGIRVVARARQSTELVKILQTTPCDVLVTDLAMPGGQYGDGLPLIGYLRRNFP
DLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLAVQHVSRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKREL
EVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAMRKLGLERDSELFQYAQSNGLMNLSSYAPGAADTGTGPTEER

Sequences:

>Translated_235_residues
MQDPIRVVVADDHPVILFGAEQALLKFQGIRVVARARQSTELVKILQTTPCDVLVTDLAMPGGQYGDGLPLIGYLRRNFP
DLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLAVQHVSRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKREL
EVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAMRKLGLERDSELFQYAQSNGLMNLSSYAPGAADTGTGPTEER
>Mature_235_residues
MQDPIRVVVADDHPVILFGAEQALLKFQGIRVVARARQSTELVKILQTTPCDVLVTDLAMPGGQYGDGLPLIGYLRRNFP
DLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLAVQHVSRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKREL
EVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAMRKLGLERDSELFQYAQSNGLMNLSSYAPGAADTGTGPTEER

Specific function: Also stimulates ftsZ expression. This suggests that rcsB is a regulator implicated in the regulation of more than one cellular function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788546, Length=207, Percent_Identity=41.0628019323672, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1786747, Length=209, Percent_Identity=28.2296650717703, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788222, Length=213, Percent_Identity=27.6995305164319, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788712, Length=210, Percent_Identity=23.8095238095238, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788521, Length=196, Percent_Identity=26.530612244898, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790102, Length=201, Percent_Identity=27.363184079602, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25815; Mature: 25815

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDPIRVVVADDHPVILFGAEQALLKFQGIRVVARARQSTELVKILQTTPCDVLVTDLAM
CCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PGGQYGDGLPLIGYLRRNFPDLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLA
CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH
VQHVSRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLN
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHH
RSIKTISTQKNTAMRKLGLERDSELFQYAQSNGLMNLSSYAPGAADTGTGPTEER
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDPIRVVVADDHPVILFGAEQALLKFQGIRVVARARQSTELVKILQTTPCDVLVTDLAM
CCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PGGQYGDGLPLIGYLRRNFPDLPIVVLTMLENAALLKRLSELGVISVVNKSDDLSHIGLA
CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHH
VQHVSRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLN
HHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHH
RSIKTISTQKNTAMRKLGLERDSELFQYAQSNGLMNLSSYAPGAADTGTGPTEER
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]