| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is engB
Identifier: 186477556
GI number: 186477556
Start: 3162386
End: 3163048
Strand: Direct
Name: engB
Synonym: Bphy_2808
Alternate gene names: 186477556
Gene position: 3162386-3163048 (Clockwise)
Preceding gene: 186477550
Following gene: 186477557
Centisome position: 90.89
GC content: 61.69
Gene sequence:
>663_bases ATGTCTTTCCTGCTCCACCAAGCCCGCTTCTTCACGACCGTCAATCACTTACGCGATCTGCCGCCTTCGCCGCAGCCCGA GGTCGCTTTCGCCGGGCGGTCGAACGCTGGAAAGTCGACGGCCATCAACATCCTCTGCAACCAGAAGCGGCTTGCATTTG CCAGTAAGACGCCAGGGCGCACGCAGCACATCAACTACTTTTCCGTAGGACCGGCGGCAGAGCCTGTCGCGAATCTCGTC GACCTGCCCGGCTACGGCTACGCCGAAGTGCCTGGTGCGGCAAAAGCACATTGGGAGCAATTGCTGTCGACTTATCTGCA AACGCGGTCGCAACTGCGCGGCATGATCCTGATGATGGATTCGCGCCGGCCGCTGACGGAACTGGATCGCCGGATGATCG AATGGTTCGCGCCGACGGGCAAGCCGATTCACACCCTGCTCACCAAGTGCGACAAATTGACCCGGCAGGAAAGCGTCAAC GCACTGCGCGCGACGAAGAAAGGGTTGGATGAATATCGCGCGGCGGGCTATCAGGGCGAACTGACCGCCCAGCTCTTTTC CGCACTGAAGCGCATCGGCCTCGATGAGGCGCACGAGCTGATTGAAAGCTGGATCGCGCCCGGCCTGGCGGGCGATCCCG ACGGGCCGGTTGCCGCGGAATAA
Upstream 100 bases:
>100_bases ACGGCGGGGCTGCATCGCCCTTGCACGGCATTTCACCATCTCCGTCGATGTGCGCAGGACGTCCGCTCGACGTCCATTCA CCCGTCCTTCTGGTCTTCTC
Downstream 100 bases:
>100_bases CGCGCGGCAACCCCGCTGACGCCGCATTTCGTTCGCCCAGAAAAAAACCCGCCGCTATTGACGGCGGGTTAAACAGCCTA ATCGAAAAACGACAGGCACC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSFLLHQARFFTTVNHLRDLPPSPQPEVAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINYFSVGPAAEPVANLV DLPGYGYAEVPGAAKAHWEQLLSTYLQTRSQLRGMILMMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVN ALRATKKGLDEYRAAGYQGELTAQLFSALKRIGLDEAHELIESWIAPGLAGDPDGPVAAE
Sequences:
>Translated_220_residues MSFLLHQARFFTTVNHLRDLPPSPQPEVAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINYFSVGPAAEPVANLV DLPGYGYAEVPGAAKAHWEQLLSTYLQTRSQLRGMILMMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVN ALRATKKGLDEYRAAGYQGELTAQLFSALKRIGLDEAHELIESWIAPGLAGDPDGPVAAE >Mature_219_residues SFLLHQARFFTTVNHLRDLPPSPQPEVAFAGRSNAGKSTAINILCNQKRLAFASKTPGRTQHINYFSVGPAAEPVANLVD LPGYGYAEVPGAAKAHWEQLLSTYLQTRSQLRGMILMMDSRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNA LRATKKGLDEYRAAGYQGELTAQLFSALKRIGLDEAHELIESWIAPGLAGDPDGPVAAE
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=144, Percent_Identity=34.7222222222222, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI145693205, Length=203, Percent_Identity=44.8275862068966, Blast_Score=171, Evalue=5e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_BURP8 (B2JI34)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001859026.1 - ProteinModelPortal: B2JI34 - SMR: B2JI34 - GeneID: 6244291 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2808 - HOGENOM: HBG447097 - OMA: RTQELIF - ProtClustDB: PRK00454 - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 24269; Mature: 24138
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLLHQARFFTTVNHLRDLPPSPQPEVAFAGRSNAGKSTAINILCNQKRLAFASKTPGR CCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHCCCCCCC TQHINYFSVGPAAEPVANLVDLPGYGYAEVPGAAKAHWEQLLSTYLQTRSQLRGMILMMD CEECCEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEC SRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRATKKGLDEYRAAGYQGE CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LTAQLFSALKRIGLDEAHELIESWIAPGLAGDPDGPVAAE HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SFLLHQARFFTTVNHLRDLPPSPQPEVAFAGRSNAGKSTAINILCNQKRLAFASKTPGR CHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHCCCCCCC TQHINYFSVGPAAEPVANLVDLPGYGYAEVPGAAKAHWEQLLSTYLQTRSQLRGMILMMD CEECCEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEC SRRPLTELDRRMIEWFAPTGKPIHTLLTKCDKLTRQESVNALRATKKGLDEYRAAGYQGE CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH LTAQLFSALKRIGLDEAHELIESWIAPGLAGDPDGPVAAE HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA