| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is aroK [H]
Identifier: 186477542
GI number: 186477542
Start: 3146469
End: 3147020
Strand: Reverse
Name: aroK [H]
Synonym: Bphy_2794
Alternate gene names: 186477542
Gene position: 3147020-3146469 (Counterclockwise)
Preceding gene: 186477543
Following gene: 186477541
Centisome position: 90.45
GC content: 65.04
Gene sequence:
>552_bases TTGCAACCGCGGGACGCACACGCCAACGTTTTTTTTGTAGGGCTCATGGGGGCAGGCAAGACCACCGTGGGCCGGGCCGT GGCGCGCCGGCTGGATCGCCCGTTCTTCGATTCTGACCATGAAATCGAAGCGCGCACGGGTGCGCGCATCCCGGTGATCT TCGAACTGGAAGGCGAATCGGGCTTCCGCGACCGCGAAGCGCAGGTGATCGCCGATCTCACTGGCCGCGAAAGCATCGTC CTCGCGACGGGCGGCGGCGCCGTCCTGCGCCCTGAAAACCGAGAGGCGCTGCGCGCGCACGGCATCGTCGTCTATCTGCG CGCCAATCCGCACGACCTCTGGCTGCGCACGCGCCGCGACAAAAACCGGCCGCTTCTGCAGACGGAAGACCCGAAAGGGC GCCTCGAAGCACTGTATGAAGTCCGCGATCCGCTCTACCGCGAATGCGCCGACTTCGTGATCGAAACGGGCCGTCCGTCC GTCAACGGGCTCGTCAATATGGTGCTGATGCAGCTCGAGATGGCGGGCGTCGCCAAGCCTACTGCGTCATAA
Upstream 100 bases:
>100_bases GCACCACCTGCGGCAGGCGCGCCGGCCGTCAGGCTCGACAAGTCGGGCGCTTTGCCAGTAAGCTGCCGCACGAACTACAC CGGATTAGCCAGAGGATAAG
Downstream 100 bases:
>100_bases TGACGAGATGACTGCCATGATTACCGTCAACGTCGAACTGGGCGAGCGCGCCTATCCCATCCATATCGGCGCCGATCTGA TCGGCAAGAGCGAGCTGTTC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MQPRDAHANVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGESGFRDREAQVIADLTGRESIV LATGGGAVLRPENREALRAHGIVVYLRANPHDLWLRTRRDKNRPLLQTEDPKGRLEALYEVRDPLYRECADFVIETGRPS VNGLVNMVLMQLEMAGVAKPTAS
Sequences:
>Translated_183_residues MQPRDAHANVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGESGFRDREAQVIADLTGRESIV LATGGGAVLRPENREALRAHGIVVYLRANPHDLWLRTRRDKNRPLLQTEDPKGRLEALYEVRDPLYRECADFVIETGRPS VNGLVNMVLMQLEMAGVAKPTAS >Mature_183_residues MQPRDAHANVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGESGFRDREAQVIADLTGRESIV LATGGGAVLRPENREALRAHGIVVYLRANPHDLWLRTRRDKNRPLLQTEDPKGRLEALYEVRDPLYRECADFVIETGRPS VNGLVNMVLMQLEMAGVAKPTAS
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=166, Percent_Identity=51.8072289156626, Blast_Score=164, Evalue=2e-42, Organism=Escherichia coli, GI1786587, Length=155, Percent_Identity=38.0645161290323, Blast_Score=90, Evalue=1e-19,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20376; Mature: 20376
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS01128 SHIKIMATE_KINASE ; PS00267 TACHYKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPRDAHANVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGES CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCC GFRDREAQVIADLTGRESIVLATGGGAVLRPENREALRAHGIVVYLRANPHDLWLRTRRD CCCCCHHEEEEECCCCCEEEEEECCCEEECCCCHHHHHHCCEEEEEECCCCEEEEEECCC KNRPLLQTEDPKGRLEALYEVRDPLYRECADFVIETGRPSVNGLVNMVLMQLEMAGVAKP CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC TAS CCC >Mature Secondary Structure MQPRDAHANVFFVGLMGAGKTTVGRAVARRLDRPFFDSDHEIEARTGARIPVIFELEGES CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCC GFRDREAQVIADLTGRESIVLATGGGAVLRPENREALRAHGIVVYLRANPHDLWLRTRRD CCCCCHHEEEEECCCCCEEEEEECCCEEECCCCHHHHHHCCEEEEEECCCCEEEEEECCC KNRPLLQTEDPKGRLEALYEVRDPLYRECADFVIETGRPSVNGLVNMVLMQLEMAGVAKP CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC TAS CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA