Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477537

Identifier: 186477537

GI number: 186477537

Start: 3141588

End: 3142295

Strand: Reverse

Name: 186477537

Synonym: Bphy_2789

Alternate gene names: NA

Gene position: 3142295-3141588 (Counterclockwise)

Preceding gene: 186477540

Following gene: 186477536

Centisome position: 90.32

GC content: 62.71

Gene sequence:

>708_bases
ATGGCACGGCTTGCACGTCTTTATGTCCCCGACCAGCCGCAGCACGTGATCCTGCGCGGACTCGACCAGCAGCCCGCTTT
CGTCGACGACCAGGATTACGAGCTGTTCATCGATTGCCTGAAGGCGGCTTCACGCGATCACCATCTGTCCGTGCATGCAT
ACGCGCTGATGCCAGGCGCGGTGCAACTGCTCGTCACGCCCACCGACGAATCGAGCCTGCCGAAAGCGATGCAGGCTGTC
GGACGGCGCTACGTTGCGCACTTCAATCGCCGTTACTCGCGACGCGGCACCTTATGGGAAGGCCGCTATCGCGCGACGGT
CATCGAAGGCGAGAAGTACTTCCTGCTGGCGAGCCGCGTGGTTGAGTTGTCGCCTGTGCGCAACCAGCTGGTGAGCGCGC
CGGAAGACTATCGATGGTCGAGCTATCGGCATCACATCGGGTTGACCTTGGACAGCTTGATCACCGACCATCGTTTGTAC
TGGTCATTGGGCAATACGCCGTTCGAACGTCAGCGCGCATACCGCGAACTGTGCGAGCAGCCGCTCGACGAACGCGAGAC
CAATCAGCTTCAACAGGCCACGCTGAAGGGCTGGGTGCTGGGCAGCGACTCATATCGGGAGTGGGCGGCGCGGGCGGCGA
ACCGGCGCGTATCGCCGTTGCCGAGAGGTCGGCCGCGCAAGGTGCGCGAGACGCCGCAAACGCAATAA

Upstream 100 bases:

>100_bases
TTCATGCGGTTTCCGGCAGACCCGCATGGCGCGTAAGGCCGCGCCGGCACAGTTTTTCGGACCTTCGGGTATGTACCAAC
GCGACTTTGGATAATCCAGC

Downstream 100 bases:

>100_bases
AGTCTCTTGCAATCAAAGGTTTGATGGCTGCATCCAAAAGAAAACGGCATCCCTGCATGCCGTTTTGTTTTGTCGGTAAT
TGATATGGAACCAATTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAASRDHHLSVHAYALMPGAVQLLVTPTDESSLPKAMQAV
GRRYVAHFNRRYSRRGTLWEGRYRATVIEGEKYFLLASRVVELSPVRNQLVSAPEDYRWSSYRHHIGLTLDSLITDHRLY
WSLGNTPFERQRAYRELCEQPLDERETNQLQQATLKGWVLGSDSYREWAARAANRRVSPLPRGRPRKVRETPQTQ

Sequences:

>Translated_235_residues
MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAASRDHHLSVHAYALMPGAVQLLVTPTDESSLPKAMQAV
GRRYVAHFNRRYSRRGTLWEGRYRATVIEGEKYFLLASRVVELSPVRNQLVSAPEDYRWSSYRHHIGLTLDSLITDHRLY
WSLGNTPFERQRAYRELCEQPLDERETNQLQQATLKGWVLGSDSYREWAARAANRRVSPLPRGRPRKVRETPQTQ
>Mature_234_residues
ARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAASRDHHLSVHAYALMPGAVQLLVTPTDESSLPKAMQAVG
RRYVAHFNRRYSRRGTLWEGRYRATVIEGEKYFLLASRVVELSPVRNQLVSAPEDYRWSSYRHHIGLTLDSLITDHRLYW
SLGNTPFERQRAYRELCEQPLDERETNQLQQATLKGWVLGSDSYREWAARAANRRVSPLPRGRPRKVRETPQTQ

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27341; Mature: 27210

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAASRDHHLSVHAYALMPGA
CCCCEEECCCCCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCE
VQLLVTPTDESSLPKAMQAVGRRYVAHFNRRYSRRGTLWEGRYRATVIEGEKYFLLASRV
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEEEHHHHH
VELSPVRNQLVSAPEDYRWSSYRHHIGLTLDSLITDHRLYWSLGNTPFERQRAYRELCEQ
HHHHHHHHHHHCCCCCCCCCCHHHECCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHC
PLDERETNQLQQATLKGWVLGSDSYREWAARAANRRVSPLPRGRPRKVRETPQTQ
CCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARLARLYVPDQPQHVILRGLDQQPAFVDDQDYELFIDCLKAASRDHHLSVHAYALMPGA
CCCEEECCCCCCHHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCE
VQLLVTPTDESSLPKAMQAVGRRYVAHFNRRYSRRGTLWEGRYRATVIEGEKYFLLASRV
EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCEEEEHHHHH
VELSPVRNQLVSAPEDYRWSSYRHHIGLTLDSLITDHRLYWSLGNTPFERQRAYRELCEQ
HHHHHHHHHHHCCCCCCCCCCHHHECCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHC
PLDERETNQLQQATLKGWVLGSDSYREWAARAANRRVSPLPRGRPRKVRETPQTQ
CCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA