| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477521
Identifier: 186477521
GI number: 186477521
Start: 3122020
End: 3122217
Strand: Reverse
Name: 186477521
Synonym: Bphy_2773
Alternate gene names: NA
Gene position: 3122217-3122020 (Counterclockwise)
Preceding gene: 186477522
Following gene: 186477520
Centisome position: 89.74
GC content: 72.73
Gene sequence:
>198_bases ATGGATATCCAGATCAACCAGAAGCCGCTGTCGCTGCCCGAAGGCGCGACCGTCGCCGACGCGCTCAGCGCGTTCGGCGC GCGGCCGCCGTTCGCCGTCGCGCTGAACGGCAATTTCGTCGCGCGCGCGCAGCATGCGGCGCGCGCGTTGCAGGCGGGCG ACCGGCTCGACGTCGTGCATCCCGTCGCGGGCGGCTGA
Upstream 100 bases:
>100_bases CGGCACAACGCGCGCTGGAGCGAGCTGTTCCGGCTCGACGACGCGCACGATCGGGCACAGACCCGGCCCGCCGCCACTTT CAACGTTTGAGCACACGGAC
Downstream 100 bases:
>100_bases GGCCGGACCTCGCGACGCACTGTCACTGACAAGGAATCACACATGAACTCACACGCGAACGCTCCCGTCGACGCGCTCAC GCTTTACGGCCAAACCTTCC
Product: sulfur carrier protein ThiS
Products: NA
Alternate protein names: Thiamine Biosynthesis Protein ThiS; ThiS Protein; Sulfur Transfer Protein Involved In Thiamine Biosynthesis; ThiS Thiamine-Biosynthesis
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MDIQINQKPLSLPEGATVADALSAFGARPPFAVALNGNFVARAQHAARALQAGDRLDVVHPVAGG
Sequences:
>Translated_65_residues MDIQINQKPLSLPEGATVADALSAFGARPPFAVALNGNFVARAQHAARALQAGDRLDVVHPVAGG >Mature_65_residues MDIQINQKPLSLPEGATVADALSAFGARPPFAVALNGNFVARAQHAARALQAGDRLDVVHPVAGG
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6661; Mature: 6661
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIQINQKPLSLPEGATVADALSAFGARPPFAVALNGNFVARAQHAARALQAGDRLDVVH CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHCCCCCCEEC PVAGG CCCCC >Mature Secondary Structure MDIQINQKPLSLPEGATVADALSAFGARPPFAVALNGNFVARAQHAARALQAGDRLDVVH CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHCCCCCCEEC PVAGG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA