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The map label for this gene is ybgI [C]

Identifier: 186477492

GI number: 186477492

Start: 3099019

End: 3099765

Strand: Reverse

Name: ybgI [C]

Synonym: Bphy_2744

Alternate gene names: 186477492

Gene position: 3099765-3099019 (Counterclockwise)

Preceding gene: 186477494

Following gene: 186477491

Centisome position: 89.09

GC content: 61.18

Gene sequence:

>747_bases
ATGGATCGGATCGAACTCGAATTGTACTTGAACAATCTTCTTGAAACCTCGCGCTTCAAGGACTATTGCCCGAACGGTCT
GCAAGTCGAAGGCCGGCGCAAAATCGACAAAATCGCGACAGGTGTAACGGCGTCGCTGGCCTTTCTCGAAGCTGCGCTGG
AGTGGGGCGCCGACGCCGTGCTGGTGCATCACGGCTACTTCTGGCGCAACGAAGCGCCGCAGGTCACGGGCCGCAAATAC
CACAGGCTCAAGGCGCTGCTCGCGAACGACATGAACCTGTTCGCATTCCACTTGCCGCTCGACGATCACCCGCTCTACGG
CAACAACGCGCAACTCGGCGCGAAGTTCGGACTGATTCCGGACGGCCGCTTCGGCGACAACGACATCGGCTGGATGAGCA
CGCTGCCCATGCCGATCACGCTCGCGCACTTCAGCGCCGAAGTCGAGCAGACGCTCGGCCGCACGCCGCTCGTACTGGGC
GATCCCGACAAGAACCTGCGCCGCGTCGCGTGGTGCACGGGCGCCGCGCAAGGCTATTTCGAGGCGGCCATCGAAGCGGG
TGCGGATGTCTATCTGACCGGGGAGATTTCCGAGCCGGTTACCCATATGTCGGCGGAAAGCGGCGTCGCGTTCGTCTCGG
CGGGCCATCACGCGACCGAACGTTATGGCGTGCAGGCGTTGGGCGCGCATTTGTCTGAGCAGTTCGAGCTCGAACATCTG
TTTATCGATATTCATAACCCAGTTTGA

Upstream 100 bases:

>100_bases
TTTGAGGGTCGCAATAATGAACATCAGCGCCAGCAGCACGGTCACCGCCTGGGCGAAGAACAGCCAAAAGCGTCTGAGCA
TCTGAAAATTAGAGGTGTAT

Downstream 100 bases:

>100_bases
ATACCGGCCGGATTACACGATCAAAAGGTTTGAAAAACGGAGGAAATGCTTAATAAAAGCCGCAAAAATGTTGGCGATCC
GTGCGGGGAAACCCTGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDRIELELYLNNLLETSRFKDYCPNGLQVEGRRKIDKIATGVTASLAFLEAALEWGADAVLVHHGYFWRNEAPQVTGRKY
HRLKALLANDMNLFAFHLPLDDHPLYGNNAQLGAKFGLIPDGRFGDNDIGWMSTLPMPITLAHFSAEVEQTLGRTPLVLG
DPDKNLRRVAWCTGAAQGYFEAAIEAGADVYLTGEISEPVTHMSAESGVAFVSAGHHATERYGVQALGAHLSEQFELEHL
FIDIHNPV

Sequences:

>Translated_248_residues
MDRIELELYLNNLLETSRFKDYCPNGLQVEGRRKIDKIATGVTASLAFLEAALEWGADAVLVHHGYFWRNEAPQVTGRKY
HRLKALLANDMNLFAFHLPLDDHPLYGNNAQLGAKFGLIPDGRFGDNDIGWMSTLPMPITLAHFSAEVEQTLGRTPLVLG
DPDKNLRRVAWCTGAAQGYFEAAIEAGADVYLTGEISEPVTHMSAESGVAFVSAGHHATERYGVQALGAHLSEQFELEHL
FIDIHNPV
>Mature_248_residues
MDRIELELYLNNLLETSRFKDYCPNGLQVEGRRKIDKIATGVTASLAFLEAALEWGADAVLVHHGYFWRNEAPQVTGRKY
HRLKALLANDMNLFAFHLPLDDHPLYGNNAQLGAKFGLIPDGRFGDNDIGWMSTLPMPITLAHFSAEVEQTLGRTPLVLG
DPDKNLRRVAWCTGAAQGYFEAAIEAGADVYLTGEISEPVTHMSAESGVAFVSAGHHATERYGVQALGAHLSEQFELEHL
FIDIHNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=248, Percent_Identity=48.7903225806452, Blast_Score=237, Evalue=5e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27426; Mature: 27426

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIELELYLNNLLETSRFKDYCPNGLQVEGRRKIDKIATGVTASLAFLEAALEWGADAV
CCEEEEEHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGYFWRNEAPQVTGRKYHRLKALLANDMNLFAFHLPLDDHPLYGNNAQLGAKFGLIP
EEECCEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEECCCC
DGRFGDNDIGWMSTLPMPITLAHFSAEVEQTLGRTPLVLGDPDKNLRRVAWCTGAAQGYF
CCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHCCCCEEECCCCCCHHEEEEECCCCHHHH
EAAIEAGADVYLTGEISEPVTHMSAESGVAFVSAGHHATERYGVQALGAHLSEQFELEHL
HHHHHCCCCEEEECCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEE
FIDIHNPV
EEEECCCC
>Mature Secondary Structure
MDRIELELYLNNLLETSRFKDYCPNGLQVEGRRKIDKIATGVTASLAFLEAALEWGADAV
CCEEEEEHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LVHHGYFWRNEAPQVTGRKYHRLKALLANDMNLFAFHLPLDDHPLYGNNAQLGAKFGLIP
EEECCEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEECCCC
DGRFGDNDIGWMSTLPMPITLAHFSAEVEQTLGRTPLVLGDPDKNLRRVAWCTGAAQGYF
CCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHCCCCEEECCCCCCHHEEEEECCCCHHHH
EAAIEAGADVYLTGEISEPVTHMSAESGVAFVSAGHHATERYGVQALGAHLSEQFELEHL
HHHHHCCCCEEEECCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEE
FIDIHNPV
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]