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The map label for this gene is sspB [H]

Identifier: 186477487

GI number: 186477487

Start: 3094758

End: 3095237

Strand: Reverse

Name: sspB [H]

Synonym: Bphy_2739

Alternate gene names: 186477487

Gene position: 3095237-3094758 (Counterclockwise)

Preceding gene: 186477488

Following gene: 186477486

Centisome position: 88.96

GC content: 61.46

Gene sequence:

>480_bases
ATGCAAGAGATTTCCACGAAGCCGTACCTGCTGCGCGCGCTCTACGAATGGTGTACCGATAACGGCTATACGCCGCATAT
CGCGGTGCGTGTCGACAACCAGACGCGCGTGCCGCGCCAATTCGTGCGGGACAACGAGATCGTGTTGAACATCAGCTTCG
AGGCGACGAGCCAGTTGCAGATGGGCAACGAGTGGATCGAGTTTCATGCGCGCTTCTCCGGCAAGTCGCACAAGATCGAG
GTGCCTGTCGCCAACGTGCTGGCCATTTACGCGCGCGAGAACGGCCAGGGCATGGCGTTCCCGGTCGAGTCAGCAGGCGG
CGAGGCGACGGATTCCGAGGACGATGAAGCCGTGATCGACGAAGCACCGGCAGCGGCGCCTGCGGCGGCGGAAAAAATCG
GCGAAACGGATGAAGGTCCGGCGCCCGACGACGATGGATCGAAAGGTGGCGGAAGAGGCCACCTCAAAGTCGTGAAATGA

Upstream 100 bases:

>100_bases
GTCGGAAAAGGTGATGCGCCGCTGAGTTTGAGATTGGCTTCGGGTGCGGCGCGCGGCGTTCCGTTGCGGTTTGCGCGCCA
GCCCGGCACGAGGACAGTTG

Downstream 100 bases:

>100_bases
AGTAGAATCGCGGACTCAAGCCGGCTTAGCTCATCAGGTAGAGCGCTTGACTTGTAATCATGAGGTGGCGGGTTCGAGTC
CTGCAGCCGGCACCAGCGTC

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQMGNEWIEFHARFSGKSHKIE
VPVANVLAIYARENGQGMAFPVESAGGEATDSEDDEAVIDEAPAAAPAAAEKIGETDEGPAPDDDGSKGGGRGHLKVVK

Sequences:

>Translated_159_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQMGNEWIEFHARFSGKSHKIE
VPVANVLAIYARENGQGMAFPVESAGGEATDSEDDEAVIDEAPAAAPAAAEKIGETDEGPAPDDDGSKGGGRGHLKVVK
>Mature_159_residues
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQMGNEWIEFHARFSGKSHKIE
VPVANVLAIYARENGQGMAFPVESAGGEATDSEDDEAVIDEAPAAAPAAAEKIGETDEGPAPDDDGSKGGGRGHLKVVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=116, Percent_Identity=47.4137931034483, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 17298; Mature: 17298

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCEEEEEEECCCCCCHH
MGNEWIEFHARFSGKSHKIEVPVANVLAIYARENGQGMAFPVESAGGEATDSEDDEAVID
CCCCEEEEEEEECCCCEEEECCHHHEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHC
EAPAAAPAAAEKIGETDEGPAPDDDGSKGGGRGHLKVVK
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MQEISTKPYLLRALYEWCTDNGYTPHIAVRVDNQTRVPRQFVRDNEIVLNISFEATSQLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCCCEEEEEEECCCCCCHH
MGNEWIEFHARFSGKSHKIEVPVANVLAIYARENGQGMAFPVESAGGEATDSEDDEAVID
CCCCEEEEEEEECCCCEEEECCHHHEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHC
EAPAAAPAAAEKIGETDEGPAPDDDGSKGGGRGHLKVVK
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]