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The map label for this gene is ybeC [H]

Identifier: 186477474

GI number: 186477474

Start: 3080892

End: 3082484

Strand: Reverse

Name: ybeC [H]

Synonym: Bphy_2726

Alternate gene names: 186477474

Gene position: 3082484-3080892 (Counterclockwise)

Preceding gene: 186477476

Following gene: 186477466

Centisome position: 88.6

GC content: 62.71

Gene sequence:

>1593_bases
GTGAAAAGTTCCATTCAACGGCACATCGGCCCGTTCGCGCTGATGCTGACGGGACTCGGCTCGATCATCGGGTCCGGCTG
GCTGTTCGGCGCCTGGAAGGCGGCCAAGATTGCGGGTCCTGCGGCGCTGTGCGCGTGGGTGATCGGCGCGGTGGTGATTC
TCGCGATTGCGCTGACCTACGCGGAACTGGGCGCGATGTTCCCGGAGTCGGGCGGCATGGTGCGTTACGCGCGCTACTCG
CACGGCGCGCTGGTGGGCTTCATCAGCGCGTGGGCCAACTGGATCGCCATCGTGTCGGTGATTCCGATCGAGGCTGAAGC
GTCGATCCAGTACATGAGCACGTGGCCGTACGAATGGGCGCATAACCTGTTCATCAACAGCGAGTTGACGACACCGGGCC
TGCTGCTGTCGGCGGTGCTCGTGGTGATCTACTTCATGCTGAACTACTGGGGCGTGAAGGTATTCGCGCGCGCCAATACC
GCGATCACGATCTTCAAGTTCATCATCCCCGGTCTGACGATTCTCGGCCTGATGATGAGCGGCTTTCACAAGGAAAACCT
CGGCGAAGCGAGCACGTTCGCGCCATACGGCTGGTCGGCGGTGCTGACGGCCGTCGCGACGAGCGGCATCGTGTTCGCGT
TCAACGGTTTCCAGAGCCCGATCAACCTCGCCGGCGAAGCGCGCAATCCGGCGAAGAGCGTGCCGTTTGCGGTGATCGGC
TCGATCCTGCTGGCGCTGGTGATCTACGTGCTGCTGCAGGTTGCGTACATCGGCGCAGTGAGTCCGGCCGACGTGATGAA
GGGCTGGAACCAGTTCAACTTCAAGTCGCCGTTCGCGGAACTGGCGATCGCGCTGAACCTGAACTGGCTCGCGATCCTGC
TGTACATCGACGCGTTCGTCAGCCCGAGCGGCACGGGCACGACCTACATGGCGACGACCACGCGCATGATCTACGCGATG
GAGCGCAACAACACGATGCCGAAGATCTTCGGCAGCGTGCATCCGCTGTACGGCGTACCGCGTCCGGCGATGTGGTTCAA
CCTGCTGGTGTCGTTCATCTTCCTGTTCTTCTTCCGTGGCTGGAGCTCACTGGCAGCGGTGATTTCGGTGGCCACGGTGA
TCTCGTACCTGACGGGCCCGATCAGCCTGATGGCGCTGCGCCGCTCGGCAACGGACCTCGAGCGTCCGCTGCACATTCCG
GGCATGGGGCTGATCGCACCGTTCGCGTTCGTGTGTGCTTCGCTGATCCTGTACTGGGCGAAGTGGCCGCTGACGGGCGA
GATCATTCTGCTGATGATCGTCGCGCTGCCGGTGTACTTCTACTTCCAGGCGAAGTCGGGCTTCTCGGGCTTCAACCAGG
ACCTGAAGGCGGCGTGGTGGCTGGTGGCGTACCTGCCCGTGATGGCGATCCTGTCGCTGATCGGCAGCAAGCAGTTCGGC
GGCATGGGCGTGCTGCCGTACGGCTGGGACATGCTGGTCGTGATCGTGTTCTCGCTGATCTTCTATTACTGGGGCGTGCA
TACGGGTTATCGCACCGGGTATCTGAACGAGCGCGAGTCGCACGACGAGATCCTCGAAGGCGTGGGCGCCTGA

Upstream 100 bases:

>100_bases
CGCGCTCGCCACCGCCCCGCCGCCTGCCCTAGTCTTTCCTATGACTTCTAACCGTGTTTCTGGCGGCGGCAGCGGCGTGC
TTTCAGATATAGGAGAAGAG

Downstream 100 bases:

>100_bases
TCTTCAGCGCTTGACTGTCTGACACAAGAAGAAGCCCGCCAGAATTCTGGCGGGCTTTTTAGTTTGCGCGACGCGATGTG
TCGTGCGGGGATCAGGCGTA

Product: amino acid permease-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MKSSIQRHIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAALCAWVIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGALVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYEWAHNLFINSELTTPGLLLSAVLVVIYFMLNYWGVKVFARANT
AITIFKFIIPGLTILGLMMSGFHKENLGEASTFAPYGWSAVLTAVATSGIVFAFNGFQSPINLAGEARNPAKSVPFAVIG
SILLALVIYVLLQVAYIGAVSPADVMKGWNQFNFKSPFAELAIALNLNWLAILLYIDAFVSPSGTGTTYMATTTRMIYAM
ERNNTMPKIFGSVHPLYGVPRPAMWFNLLVSFIFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRSATDLERPLHIP
GMGLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFYFQAKSGFSGFNQDLKAAWWLVAYLPVMAILSLIGSKQFG
GMGVLPYGWDMLVVIVFSLIFYYWGVHTGYRTGYLNERESHDEILEGVGA

Sequences:

>Translated_530_residues
MKSSIQRHIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAALCAWVIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGALVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYEWAHNLFINSELTTPGLLLSAVLVVIYFMLNYWGVKVFARANT
AITIFKFIIPGLTILGLMMSGFHKENLGEASTFAPYGWSAVLTAVATSGIVFAFNGFQSPINLAGEARNPAKSVPFAVIG
SILLALVIYVLLQVAYIGAVSPADVMKGWNQFNFKSPFAELAIALNLNWLAILLYIDAFVSPSGTGTTYMATTTRMIYAM
ERNNTMPKIFGSVHPLYGVPRPAMWFNLLVSFIFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRSATDLERPLHIP
GMGLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFYFQAKSGFSGFNQDLKAAWWLVAYLPVMAILSLIGSKQFG
GMGVLPYGWDMLVVIVFSLIFYYWGVHTGYRTGYLNERESHDEILEGVGA
>Mature_530_residues
MKSSIQRHIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAALCAWVIGAVVILAIALTYAELGAMFPESGGMVRYARYS
HGALVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYEWAHNLFINSELTTPGLLLSAVLVVIYFMLNYWGVKVFARANT
AITIFKFIIPGLTILGLMMSGFHKENLGEASTFAPYGWSAVLTAVATSGIVFAFNGFQSPINLAGEARNPAKSVPFAVIG
SILLALVIYVLLQVAYIGAVSPADVMKGWNQFNFKSPFAELAIALNLNWLAILLYIDAFVSPSGTGTTYMATTTRMIYAM
ERNNTMPKIFGSVHPLYGVPRPAMWFNLLVSFIFLFFFRGWSSLAAVISVATVISYLTGPISLMALRRSATDLERPLHIP
GMGLIAPFAFVCASLILYWAKWPLTGEIILLMIVALPVYFYFQAKSGFSGFNQDLKAAWWLVAYLPVMAILSLIGSKQFG
GMGVLPYGWDMLVVIVFSLIFYYWGVHTGYRTGYLNERESHDEILEGVGA

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

Organism=Homo sapiens, GI33286428, Length=470, Percent_Identity=25.3191489361702, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI4507047, Length=424, Percent_Identity=23.3490566037736, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI110347453, Length=353, Percent_Identity=24.929178470255, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI71979932, Length=456, Percent_Identity=24.1228070175439, Blast_Score=77, Evalue=6e-14,
Organism=Homo sapiens, GI187423910, Length=420, Percent_Identity=22.1428571428571, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI7657591, Length=420, Percent_Identity=22.1428571428571, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI7657683, Length=414, Percent_Identity=24.1545893719807, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI258614005, Length=424, Percent_Identity=23.3490566037736, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI115648063, Length=346, Percent_Identity=23.6994219653179, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI115648022, Length=346, Percent_Identity=23.6994219653179, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI258614003, Length=413, Percent_Identity=23.4866828087167, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI181337167, Length=289, Percent_Identity=27.681660899654, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI114326544, Length=428, Percent_Identity=23.1308411214953, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI114326550, Length=428, Percent_Identity=23.1308411214953, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI87082250, Length=463, Percent_Identity=25.9179265658747, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1786302, Length=404, Percent_Identity=24.7524752475248, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786789, Length=456, Percent_Identity=23.9035087719298, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1786602, Length=369, Percent_Identity=25.4742547425474, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI48994972, Length=354, Percent_Identity=25.9887005649718, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788480, Length=361, Percent_Identity=25.4847645429363, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789017, Length=342, Percent_Identity=23.9766081871345, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790653, Length=361, Percent_Identity=22.7146814404432, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081869, Length=301, Percent_Identity=23.9202657807309, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87081708, Length=392, Percent_Identity=25.765306122449, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87081915, Length=372, Percent_Identity=23.1182795698925, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787890, Length=410, Percent_Identity=25.3658536585366, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17540018, Length=437, Percent_Identity=25.629290617849, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17531343, Length=417, Percent_Identity=23.7410071942446, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17532491, Length=410, Percent_Identity=23.4146341463415, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI32566699, Length=325, Percent_Identity=24.9230769230769, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17533459, Length=430, Percent_Identity=23.7209302325581, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24667468, Length=419, Percent_Identity=25.5369928400955, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24651635, Length=442, Percent_Identity=26.0180995475113, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24651633, Length=442, Percent_Identity=26.0180995475113, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI221512776, Length=419, Percent_Identity=22.673031026253, Blast_Score=84, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24666159, Length=419, Percent_Identity=22.1957040572792, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21357367, Length=451, Percent_Identity=25.9423503325942, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI45550968, Length=414, Percent_Identity=25.1207729468599, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19921172, Length=414, Percent_Identity=25.1207729468599, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161077963, Length=337, Percent_Identity=25.5192878338279, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 57990; Mature: 57990

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSIQRHIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAALCAWVIGAVVILAIALTY
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AELGAMFPESGGMVRYARYSHGALVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYEWA
HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCHHHH
HNLFINSELTTPGLLLSAVLVVIYFMLNYWGVKVFARANTAITIFKFIIPGLTILGLMMS
HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHH
GFHKENLGEASTFAPYGWSAVLTAVATSGIVFAFNGFQSPINLAGEARNPAKSVPFAVIG
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHCCCCCCCCCCCCHHHHH
SILLALVIYVLLQVAYIGAVSPADVMKGWNQFNFKSPFAELAIALNLNWLAILLYIDAFV
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHC
SPSGTGTTYMATTTRMIYAMERNNTMPKIFGSVHPLYGVPRPAMWFNLLVSFIFLFFFRG
CCCCCCCEEEEEHHHHEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
WSSLAAVISVATVISYLTGPISLMALRRSATDLERPLHIPGMGLIAPFAFVCASLILYWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
KWPLTGEIILLMIVALPVYFYFQAKSGFSGFNQDLKAAWWLVAYLPVMAILSLIGSKQFG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GMGVLPYGWDMLVVIVFSLIFYYWGVHTGYRTGYLNERESHDEILEGVGA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MKSSIQRHIGPFALMLTGLGSIIGSGWLFGAWKAAKIAGPAALCAWVIGAVVILAIALTY
CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AELGAMFPESGGMVRYARYSHGALVGFISAWANWIAIVSVIPIEAEASIQYMSTWPYEWA
HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHCCCHHHH
HNLFINSELTTPGLLLSAVLVVIYFMLNYWGVKVFARANTAITIFKFIIPGLTILGLMMS
HHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHH
GFHKENLGEASTFAPYGWSAVLTAVATSGIVFAFNGFQSPINLAGEARNPAKSVPFAVIG
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCHHHCCCCCCCCCCCCHHHHH
SILLALVIYVLLQVAYIGAVSPADVMKGWNQFNFKSPFAELAIALNLNWLAILLYIDAFV
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHC
SPSGTGTTYMATTTRMIYAMERNNTMPKIFGSVHPLYGVPRPAMWFNLLVSFIFLFFFRG
CCCCCCCEEEEEHHHHEEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
WSSLAAVISVATVISYLTGPISLMALRRSATDLERPLHIPGMGLIAPFAFVCASLILYWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
KWPLTGEIILLMIVALPVYFYFQAKSGFSGFNQDLKAAWWLVAYLPVMAILSLIGSKQFG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GMGVLPYGWDMLVVIVFSLIFYYWGVHTGYRTGYLNERESHDEILEGVGA
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]