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The map label for this gene is yfjD [H]

Identifier: 186477402

GI number: 186477402

Start: 2994406

End: 2995623

Strand: Direct

Name: yfjD [H]

Synonym: Bphy_2654

Alternate gene names: 186477402

Gene position: 2994406-2995623 (Clockwise)

Preceding gene: 186477401

Following gene: 186477403

Centisome position: 86.07

GC content: 60.34

Gene sequence:

>1218_bases
ATGATGGCCATCAACCGCCATCGCCTGAAACATCTCGCGACCAAAGGCGCACTTGGCGCCAAAACGACCCAAGGCCTGCT
CGCGCGCACCGATGAGTTGCTGAGCGCCGTCCTGATCGGCAACAATCTGTTCAATACAATCATCCCTGTTCTCACGACGT
CGATCGCGCTGCACACCTTCGGCAGCAATAGCGTGGTGCTGTCGATTGCCACGGGTATCGTCGCGTTCCTGATCATCGTG
TTCGCCGAAATCACGCCGAAGATCGTCGGCGCGACGTTTCCGGAAAAGATCGCGCTACCCGCCAGTCTGTTGATCGCGCC
GCTGATGCGCGCGTCGAAGCCGCTGATCTGGTTCGTCAATCTGTTCGCGAACGCCATCCTGCGCGTACTGCATATCAACA
CGAAAAGCGCCCACGACCAGCGGCTGTCGATGGAAGAACTGCGCACCATCGTGCTCGAGTCCGGCAGCTTCATGCCGACC
AAGCACCGCAGCATTCTGCTGAACCTGTTCGACCTGGAGAACATCACCGTCGACGACGTGATGATCCCGCGCCGCCGTAT
CGAAGCGCTCGACTTCGACGCACCGTTCGAACAGATCCTGCATCAGCTCGAAACCTGCTATCACAACAAGCTGGTCGTGT
ATCAGGGCGATTTCGACCGCGTTCTCGGCGTGCTCCATGTGCGCAAGACGCTGTCCGCGCTACATAACCAGGAACTGGAG
CGCGAAACGCTGCGCGGACTGCTCGCCGAGCCCTACTTCGTCCCGACAGGCACGCCCGTCTTCCAGCAACTGCAGTTCTT
TCAGGAAAGCCGCCATCGCGCCGCGCTCGTCGTCGACGAATATGGCGAGCTGCAGGGACTCGTGACGCCCGAGGACATCA
TCGAAGAGCTGATCGGCGAGTTCACGACGTCGGTGCCGCGCAGCGCGAGCTCGCGCGGCGGCTGGAACGAGGACGGCGAA
TGCATCGTCGCGGGCAGCATGCCGTTGCGCGAACTCAATCGCTGGCTGCAACTGAAATTGCCGACGGATGGCCCGAAGAC
GTTGAACGGATTGATCCTGGAAATTCTCGAAGAAATTCCTGAAGGCGATGTCTGCGTGAAGATCGCGGACGTCAAGCTGG
AAGTTTTGCGCAGCGACGACCAGGCGGTCAGAACTGTCAAGATCTTTCGCCCTGGTCCGCCGGCGGGCTCGAAGATCAAG
CGCCTCGTGCGCCGCTGA

Upstream 100 bases:

>100_bases
TTATTCACGTCGCGTGGAACAACTTCCCTTATGGGCGCAAATAGGCGCCGTCGTCCTGCTTCTCATCTGCTCCAGCTTCT
TCTCCATTACCGAGACAGCG

Downstream 100 bases:

>100_bases
CACTCGGTTGGCCAATCGGCCGAATAGTCTGCACGCGCACGCTCCCGGATGATGAAGCCGTCATTTCTACAGGCGGCCCT
CAGCCGGTATTCGATGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MMAINRHRLKHLATKGALGAKTTQGLLARTDELLSAVLIGNNLFNTIIPVLTTSIALHTFGSNSVVLSIATGIVAFLIIV
FAEITPKIVGATFPEKIALPASLLIAPLMRASKPLIWFVNLFANAILRVLHINTKSAHDQRLSMEELRTIVLESGSFMPT
KHRSILLNLFDLENITVDDVMIPRRRIEALDFDAPFEQILHQLETCYHNKLVVYQGDFDRVLGVLHVRKTLSALHNQELE
RETLRGLLAEPYFVPTGTPVFQQLQFFQESRHRAALVVDEYGELQGLVTPEDIIEELIGEFTTSVPRSASSRGGWNEDGE
CIVAGSMPLRELNRWLQLKLPTDGPKTLNGLILEILEEIPEGDVCVKIADVKLEVLRSDDQAVRTVKIFRPGPPAGSKIK
RLVRR

Sequences:

>Translated_405_residues
MMAINRHRLKHLATKGALGAKTTQGLLARTDELLSAVLIGNNLFNTIIPVLTTSIALHTFGSNSVVLSIATGIVAFLIIV
FAEITPKIVGATFPEKIALPASLLIAPLMRASKPLIWFVNLFANAILRVLHINTKSAHDQRLSMEELRTIVLESGSFMPT
KHRSILLNLFDLENITVDDVMIPRRRIEALDFDAPFEQILHQLETCYHNKLVVYQGDFDRVLGVLHVRKTLSALHNQELE
RETLRGLLAEPYFVPTGTPVFQQLQFFQESRHRAALVVDEYGELQGLVTPEDIIEELIGEFTTSVPRSASSRGGWNEDGE
CIVAGSMPLRELNRWLQLKLPTDGPKTLNGLILEILEEIPEGDVCVKIADVKLEVLRSDDQAVRTVKIFRPGPPAGSKIK
RLVRR
>Mature_405_residues
MMAINRHRLKHLATKGALGAKTTQGLLARTDELLSAVLIGNNLFNTIIPVLTTSIALHTFGSNSVVLSIATGIVAFLIIV
FAEITPKIVGATFPEKIALPASLLIAPLMRASKPLIWFVNLFANAILRVLHINTKSAHDQRLSMEELRTIVLESGSFMPT
KHRSILLNLFDLENITVDDVMIPRRRIEALDFDAPFEQILHQLETCYHNKLVVYQGDFDRVLGVLHVRKTLSALHNQELE
RETLRGLLAEPYFVPTGTPVFQQLQFFQESRHRAALVVDEYGELQGLVTPEDIIEELIGEFTTSVPRSASSRGGWNEDGE
CIVAGSMPLRELNRWLQLKLPTDGPKTLNGLILEILEEIPEGDVCVKIADVKLEVLRSDDQAVRTVKIFRPGPPAGSKIK
RLVRR

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=318, Percent_Identity=25.4716981132075, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI145693175, Length=394, Percent_Identity=40.3553299492386, Blast_Score=313, Evalue=2e-86,
Organism=Escherichia coli, GI87082033, Length=333, Percent_Identity=30.03003003003, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1790664, Length=415, Percent_Identity=24.3373493975904, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788119, Length=279, Percent_Identity=23.6559139784946, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1786879, Length=270, Percent_Identity=22.5925925925926, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 45161; Mature: 45161

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAINRHRLKHLATKGALGAKTTQGLLARTDELLSAVLIGNNLFNTIIPVLTTSIALHTF
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEC
GSNSVVLSIATGIVAFLIIVFAEITPKIVGATFPEKIALPASLLIAPLMRASKPLIWFVN
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHH
LFANAILRVLHINTKSAHDQRLSMEELRTIVLESGSFMPTKHRSILLNLFDLENITVDDV
HHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCEEHHH
MIPRRRIEALDFDAPFEQILHQLETCYHNKLVVYQGDFDRVLGVLHVRKTLSALHNQELE
HCCHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
RETLRGLLAEPYFVPTGTPVFQQLQFFQESRHRAALVVDEYGELQGLVTPEDIIEELIGE
HHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
FTTSVPRSASSRGGWNEDGECIVAGSMPLRELNRWLQLKLPTDGPKTLNGLILEILEEIP
HHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCC
EGDVCVKIADVKLEVLRSDDQAVRTVKIFRPGPPAGSKIKRLVRR
CCCEEEEEECCEEEECCCCCHHEEEEEEECCCCCCCHHHHHHHCC
>Mature Secondary Structure
MMAINRHRLKHLATKGALGAKTTQGLLARTDELLSAVLIGNNLFNTIIPVLTTSIALHTF
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEC
GSNSVVLSIATGIVAFLIIVFAEITPKIVGATFPEKIALPASLLIAPLMRASKPLIWFVN
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHH
LFANAILRVLHINTKSAHDQRLSMEELRTIVLESGSFMPTKHRSILLNLFDLENITVDDV
HHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCEEHHH
MIPRRRIEALDFDAPFEQILHQLETCYHNKLVVYQGDFDRVLGVLHVRKTLSALHNQELE
HCCHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
RETLRGLLAEPYFVPTGTPVFQQLQFFQESRHRAALVVDEYGELQGLVTPEDIIEELIGE
HHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
FTTSVPRSASSRGGWNEDGECIVAGSMPLRELNRWLQLKLPTDGPKTLNGLILEILEEIP
HHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCEEEEECCCCCCHHHHHHHHHHHHHCC
EGDVCVKIADVKLEVLRSDDQAVRTVKIFRPGPPAGSKIKRLVRR
CCCEEEEEECCEEEECCCCCHHEEEEEEECCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]