| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is fur [H]
Identifier: 186477341
GI number: 186477341
Start: 2931049
End: 2931477
Strand: Direct
Name: fur [H]
Synonym: Bphy_2593
Alternate gene names: 186477341
Gene position: 2931049-2931477 (Clockwise)
Preceding gene: 186477331
Following gene: 186477345
Centisome position: 84.25
GC content: 56.18
Gene sequence:
>429_bases ATGACCAATCCAACCGATCTGAAAAATATCGGACTCAAGGCGACCCTACCGCGCCTCAAGATTCTGGAAATCTTTCAGCA CAGCCCGGTGCGCCATCTGACCGCCGAAGATGTCTACCGCAATCTGCTGCATGAAGAGCTGGATATCGGGCTCGCCACGG TGTATCGCGTGCTCACGCAGTTCGAGCAGGCAGGTTTGCTGTCGCGTAGCAACTTCGAGTCGGGTAAAGCCGTTTTTGAG CTGAACGAAGGGACGCACCATGACCATCTGGTGTGTATCGACTGCGGTCTCGTCGAAGAATTTTTCGACCCCGAAATCGA AAATCGCCAGCAGGCGATCGCGAAAGAACGCGGCTTCAAGCTCCAGGAACACGCGCTCGCGCTCTACGGCGCGTGCACGA AGGACAAGTGTCCGCACCGCAAGCATTGA
Upstream 100 bases:
>100_bases TGCGGGCTTACCGAGCCGCGCGTGTTTCCGTGTAAGATGACCTGAACAGCAATTCACATTACTATTAGAACCCCGCATTG TACTCTAGGGATCCCTTGCC
Downstream 100 bases:
>100_bases CGCATTTTCAGTAAGAAGCAGAAAGGCCCGGCTGATGAGAATCAACCGGGCCTTTTGCTTTCCCTCGCTTACCGGGAGGC AACGACGCGACTAGACAGCA
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTNPTDLKNIGLKATLPRLKILEIFQHSPVRHLTAEDVYRNLLHEELDIGLATVYRVLTQFEQAGLLSRSNFESGKAVFE LNEGTHHDHLVCIDCGLVEEFFDPEIENRQQAIAKERGFKLQEHALALYGACTKDKCPHRKH
Sequences:
>Translated_142_residues MTNPTDLKNIGLKATLPRLKILEIFQHSPVRHLTAEDVYRNLLHEELDIGLATVYRVLTQFEQAGLLSRSNFESGKAVFE LNEGTHHDHLVCIDCGLVEEFFDPEIENRQQAIAKERGFKLQEHALALYGACTKDKCPHRKH >Mature_141_residues TNPTDLKNIGLKATLPRLKILEIFQHSPVRHLTAEDVYRNLLHEELDIGLATVYRVLTQFEQAGLLSRSNFESGKAVFEL NEGTHHDHLVCIDCGLVEEFFDPEIENRQQAIAKERGFKLQEHALALYGACTKDKCPHRKH
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=140, Percent_Identity=54.2857142857143, Blast_Score=157, Evalue=4e-40,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16232; Mature: 16101
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPTDLKNIGLKATLPRLKILEIFQHSPVRHLTAEDVYRNLLHEELDIGLATVYRVLTQ CCCCCCHHHCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH FEQAGLLSRSNFESGKAVFELNEGTHHDHLVCIDCGLVEEFFDPEIENRQQAIAKERGFK HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHCCC LQEHALALYGACTKDKCPHRKH HHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TNPTDLKNIGLKATLPRLKILEIFQHSPVRHLTAEDVYRNLLHEELDIGLATVYRVLTQ CCCCCHHHCCCCCCCCHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH FEQAGLLSRSNFESGKAVFELNEGTHHDHLVCIDCGLVEEFFDPEIENRQQAIAKERGFK HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHCCC LQEHALALYGACTKDKCPHRKH HHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA