| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477314
Identifier: 186477314
GI number: 186477314
Start: 2886481
End: 2887446
Strand: Reverse
Name: 186477314
Synonym: Bphy_2566
Alternate gene names: NA
Gene position: 2887446-2886481 (Counterclockwise)
Preceding gene: 186477315
Following gene: 186477312
Centisome position: 82.99
GC content: 65.84
Gene sequence:
>966_bases ATGTCGTGCGGTGCAGTTTCACCGGATGGGGCGCTGAAACGCGCCGCCCCGGGTTTCGCGGATATCGACTGGTCGCGGCC GTGGTTTGCGCAGGTCGCGGCGCGTGGCGTGCGCTGGCAGCAGGCGGCGTTGCGGGGCGCGGCGCAGCAGTTGCGCGAGA TGAACGCGGACGCTGGGTCCGCCGTCATCACAACGGGACGGGGGAAGCGGCTTACCTTCATTCCGCAGGACGAACTGCCG CCCGGCACGGCGTACGAGGCGCATATCGCAGCAACGGGCTGCGTGCCGACGCGCCACAATCTGCACGACTTCTTCAACGC ATTGACCTGGTTTCAGTTTCCGCGCATCAAGGCGGCGTTGAGCGCACGCGGCTCGGCGGCGGTCGATGCGCTGGGCATCG GCCCGACGCGCGGTGACACGCGCGACGCGTTGACCGTATTCGATGAGAACGCCGTGCTGTTCGCATGCTCGGACCCGGCG CTGAGCACGGCACTGCAAGCGTTCAGCTGGAAGACGCTGTTTGTCGCACAGCGCGCGGCATGGGACGAGCGCTGCGAAGT GCGCTGTTTCGGGCATGCGCTACTGGAAAAGCTCGTCACCCCTTACAAAGCGTGTACGGGGCATGCGTGGATCGTCGAGG TCCCATCGGCGTATTTCACGTGGACACGCGCTGCGCGCGACTCGTTTCTCGATGACACCGTCGCCCGGGTGCTGCTGGAA GGCGCCGGCTTCAGCAGCCAGATGTTCGCGCCGCTACCTGTGCTCGGTATTCCCGGCTGGTGGGCCGATAATGAGACAGA GTCTTTCTACGACGATGCCTCCGTGTTTCGCAGCGGCCGGCGGTCTCGCGTCGCGCCGGATGGTAAAATCGCGGCCAGCA AAGTAGGCCAGGCAGTCGCGGCTTCGCTGGTTTCGGCTGGCGAGGGCGAGGAAAGTCCGGACTCCACAGGGCAGGGTGAT GGCTAA
Upstream 100 bases:
>100_bases ACGCTGCCCGCGGAGCTCGAGGCTGGTGATACGCCCGTCGTGCCATTGCGCGGCGGCGAAGCGATCGGCTGGAAGCTCAT CTGAGGGCTTGGCTGACGAT
Downstream 100 bases:
>100_bases CGGCCATCCGTGGCGACACGCGGAACAGGGCAACAGAAAGCAAACCGCCGATGGCCCGTCGCAAGACGGGATCAGGTAAG GGTGAAACGGTGCGGTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Putative Transmembrane Protein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSCGAVSPDGALKRAAPGFADIDWSRPWFAQVAARGVRWQQAALRGAAQQLREMNADAGSAVITTGRGKRLTFIPQDELP PGTAYEAHIAATGCVPTRHNLHDFFNALTWFQFPRIKAALSARGSAAVDALGIGPTRGDTRDALTVFDENAVLFACSDPA LSTALQAFSWKTLFVAQRAAWDERCEVRCFGHALLEKLVTPYKACTGHAWIVEVPSAYFTWTRAARDSFLDDTVARVLLE GAGFSSQMFAPLPVLGIPGWWADNETESFYDDASVFRSGRRSRVAPDGKIAASKVGQAVAASLVSAGEGEESPDSTGQGD G
Sequences:
>Translated_321_residues MSCGAVSPDGALKRAAPGFADIDWSRPWFAQVAARGVRWQQAALRGAAQQLREMNADAGSAVITTGRGKRLTFIPQDELP PGTAYEAHIAATGCVPTRHNLHDFFNALTWFQFPRIKAALSARGSAAVDALGIGPTRGDTRDALTVFDENAVLFACSDPA LSTALQAFSWKTLFVAQRAAWDERCEVRCFGHALLEKLVTPYKACTGHAWIVEVPSAYFTWTRAARDSFLDDTVARVLLE GAGFSSQMFAPLPVLGIPGWWADNETESFYDDASVFRSGRRSRVAPDGKIAASKVGQAVAASLVSAGEGEESPDSTGQGD G >Mature_320_residues SCGAVSPDGALKRAAPGFADIDWSRPWFAQVAARGVRWQQAALRGAAQQLREMNADAGSAVITTGRGKRLTFIPQDELPP GTAYEAHIAATGCVPTRHNLHDFFNALTWFQFPRIKAALSARGSAAVDALGIGPTRGDTRDALTVFDENAVLFACSDPAL STALQAFSWKTLFVAQRAAWDERCEVRCFGHALLEKLVTPYKACTGHAWIVEVPSAYFTWTRAARDSFLDDTVARVLLEG AGFSSQMFAPLPVLGIPGWWADNETESFYDDASVFRSGRRSRVAPDGKIAASKVGQAVAASLVSAGEGEESPDSTGQGDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34386; Mature: 34255
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCGAVSPDGALKRAAPGFADIDWSRPWFAQVAARGVRWQQAALRGAAQQLREMNADAGS CCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC AVITTGRGKRLTFIPQDELPPGTAYEAHIAATGCVPTRHNLHDFFNALTWFQFPRIKAAL EEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH SARGSAAVDALGIGPTRGDTRDALTVFDENAVLFACSDPALSTALQAFSWKTLFVAQRAA HCCCCCHHHEECCCCCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH WDERCEVRCFGHALLEKLVTPYKACTGHAWIVEVPSAYFTWTRAARDSFLDDTVARVLLE HHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH GAGFSSQMFAPLPVLGIPGWWADNETESFYDDASVFRSGRRSRVAPDGKIAASKVGQAVA CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ASLVSAGEGEESPDSTGQGDG HHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SCGAVSPDGALKRAAPGFADIDWSRPWFAQVAARGVRWQQAALRGAAQQLREMNADAGS CCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC AVITTGRGKRLTFIPQDELPPGTAYEAHIAATGCVPTRHNLHDFFNALTWFQFPRIKAAL EEEECCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH SARGSAAVDALGIGPTRGDTRDALTVFDENAVLFACSDPALSTALQAFSWKTLFVAQRAA HCCCCCHHHEECCCCCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH WDERCEVRCFGHALLEKLVTPYKACTGHAWIVEVPSAYFTWTRAARDSFLDDTVARVLLE HHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH GAGFSSQMFAPLPVLGIPGWWADNETESFYDDASVFRSGRRSRVAPDGKIAASKVGQAVA CCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ASLVSAGEGEESPDSTGQGDG HHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA