| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is erpA1 [H]
Identifier: 186477310
GI number: 186477310
Start: 2883593
End: 2883958
Strand: Reverse
Name: erpA1 [H]
Synonym: Bphy_2562
Alternate gene names: 186477310
Gene position: 2883958-2883593 (Counterclockwise)
Preceding gene: 186477311
Following gene: 186477308
Centisome position: 82.89
GC content: 56.28
Gene sequence:
>366_bases ATGGACGCAGTGACCGACACCCCCGTGACCGAGATGCCGGCACCGTTCGTCTTTACTGACGCAGCGGCTGACAAGGTCAA AGAACTGATCGAAGAAGAAGGCAACCCGGAGCTCAAGCTGCGCGTTTTCGTGCAAGGTGGCGGCTGCTCCGGCTTTCAAT ATGGTTTCACCTTCGACGAAGCAATCAACGAAGACGACACTGTGATGAACAAGAGCGGCGTCCAGCTGCTGATCGACTCG ATGAGCTACCAGTATCTGGTGGGCGCGGAGATCGACTACAAGGACGACATCAACGGTGCTCAGTTCGTGATCAAGAACCC GAACGCCACGACCACTTGCGGTTGCGGTTCGTCGTTTTCGGTGTGA
Upstream 100 bases:
>100_bases TTCAGCCGCGCCGCATAAGAGCCTATTGATTTCATGGGCATCGGCACGATATCGGGAAGAGCAATACAATAGCGACTAGA AGCTATTTTGGAGAGTTCGC
Downstream 100 bases:
>100_bases TCGCACCTTACTTCGCGGTTTACGCCACGTCAGTGGCGGCAAAACGGGGCTTCGGCCCCGTTTTTTATTTGTGCGCGTCA ACGCGGGTAAATCGCGCCGA
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MDAVTDTPVTEMPAPFVFTDAAADKVKELIEEEGNPELKLRVFVQGGGCSGFQYGFTFDEAINEDDTVMNKSGVQLLIDS MSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFSV
Sequences:
>Translated_121_residues MDAVTDTPVTEMPAPFVFTDAAADKVKELIEEEGNPELKLRVFVQGGGCSGFQYGFTFDEAINEDDTVMNKSGVQLLIDS MSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFSV >Mature_121_residues MDAVTDTPVTEMPAPFVFTDAAADKVKELIEEEGNPELKLRVFVQGGGCSGFQYGFTFDEAINEDDTVMNKSGVQLLIDS MSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFSV
Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=105, Percent_Identity=40.9523809523809, Blast_Score=86, Evalue=5e-18, Organism=Homo sapiens, GI52426768, Length=122, Percent_Identity=31.1475409836066, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=59.4594594594595, Blast_Score=150, Evalue=2e-38, Organism=Escherichia coli, GI1788877, Length=104, Percent_Identity=33.6538461538462, Blast_Score=65, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71998452, Length=105, Percent_Identity=40, Blast_Score=82, Evalue=7e-17, Organism=Caenorhabditis elegans, GI25146411, Length=114, Percent_Identity=29.8245614035088, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193209025, Length=112, Percent_Identity=30.3571428571429, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323001, Length=97, Percent_Identity=40.2061855670103, Blast_Score=76, Evalue=1e-15, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=46.9879518072289, Blast_Score=83, Evalue=3e-17, Organism=Drosophila melanogaster, GI24642263, Length=120, Percent_Identity=31.6666666666667, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 13082; Mature: 13082
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVTDTPVTEMPAPFVFTDAAADKVKELIEEEGNPELKLRVFVQGGGCSGFQYGFTFDE CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEHHH AINEDDTVMNKSGVQLLIDSMSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFS HCCCCCCEECCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCC V C >Mature Secondary Structure MDAVTDTPVTEMPAPFVFTDAAADKVKELIEEEGNPELKLRVFVQGGGCSGFQYGFTFDE CCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEHHH AINEDDTVMNKSGVQLLIDSMSYQYLVGAEIDYKDDINGAQFVIKNPNATTTCGCGSSFS HCCCCCCEECCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEECCCCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA