| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pntAA [H]
Identifier: 186477291
GI number: 186477291
Start: 2863609
End: 2864751
Strand: Reverse
Name: pntAA [H]
Synonym: Bphy_2543
Alternate gene names: 186477291
Gene position: 2864751-2863609 (Counterclockwise)
Preceding gene: 186477295
Following gene: 186477290
Centisome position: 82.34
GC content: 65.0
Gene sequence:
>1143_bases ATGCACATCGGAGTGCCAGCCGAGACGCGGCCGTACGAAACACGCGTCGCCGCGACGCCCGAGACGGTCAAGAAGTACGT GTCGCAGGGCCACAGGGTTAGCGTACAGCGCGGCGCAGGGACGGCCGCAAGTTATCTGGACGACGCGTACGCAGCTGCGG GCGCAGAGCTCGTCGATGCGCCAGCCGCATTCGGCGCAGAGCTCGTTCTCAAGGTTCAAAGCCCGACCGATTCAGAACTC CCGCTTCTCAAACGCGGCTCGGTACTGGTCGGCATGCTCGAGCCGTTTAATGCTGAAAACGCATCGAAGCTAGCAACTGC CGGCATCACTGCGTTCGCGCTCGAAGCCGCGCCGCGCACGACGCGTGCGCAAAGCCTCGACGTACTGTCGTCTCAAGCCA ACATTGCGGGTTATAAAGCGGTGCTGCTCGCCGCCGACCTGTATCCGCGTTTCATGCCGATGCTGATGACGGCGGCGGGC ACGGTGAAAGCCGCGCGCGTGCTGATTCTCGGCGCGGGCGTGGCGGGCTTGCAGGCGATTGCGACTGCAAAGCGCCTGGG TGCCGTGATCGAAGCCTCAGACGTGCGGCCTGCCGTGAAAGAGCAGATCGAATCGCTCGGGGCGAAATTCCTCGACGTGC CTTACGAAACCGATGAGGAGCGCGAAGCGGCGCAAGGCGTCGGCGGCTACGCGCGGCCGATGCCGCCTTCGTGGCTCGCA CGCCAGTCGGCGCTCGTCCATGAACGCGCGAAGCAGGCCGACGTGATCATCTCCACCGCGCTGATTCCGGGGCGTCCCGC GCCGACGCTGCTTTCCGTGGAAACGGTGCAGGCGATGAAGCCGGGCTCCGTGGTGATCGACCTCGCGGCGGGACGCGGGC CGGAGTACGAAGGCCAGCGCGGCGGCAACTGTCCGCTGACGGAAGCGGACAAGGTCGTCGTCAAGCACGGCGTGACGATC GCGGGATATACGAATCTCGCGTCGATGGTCGCATCCGATGCTTCGGCGCTGTATGCGCGCAACCTGCTCGACTTCATGAA GCTGATCGTCACGAAGGAAGGCACGCTCAATATCGATCTCGCGGACGACATCGTCGCGGCCACGCTGCTGGCCCGCGACG GCGAAGTCACGCGCAAGGCATAA
Upstream 100 bases:
>100_bases AGCCGTGCGTAGCCGTTGCACTTGCCTTTTGCATTGCCGGCGTTGCCCTTCGTCGGCGATTCCAGATTTTCATAACAGGA TGGTCGAAGGAGGATTTACG
Downstream 100 bases:
>100_bases GCGCACTCACGTGCATGGGACCAGAGTAAAGCGCTGAAGCGCCGGCTCTGACCGACAGGAGAGAGGAAGATGGAAGTCAT CAACCATACCGTGATCAATC
Product: NAD(P)(+) transhydrogenase
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MHIGVPAETRPYETRVAATPETVKKYVSQGHRVSVQRGAGTAASYLDDAYAAAGAELVDAPAAFGAELVLKVQSPTDSEL PLLKRGSVLVGMLEPFNAENASKLATAGITAFALEAAPRTTRAQSLDVLSSQANIAGYKAVLLAADLYPRFMPMLMTAAG TVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPYETDEEREAAQGVGGYARPMPPSWLA RQSALVHERAKQADVIISTALIPGRPAPTLLSVETVQAMKPGSVVIDLAAGRGPEYEGQRGGNCPLTEADKVVVKHGVTI AGYTNLASMVASDASALYARNLLDFMKLIVTKEGTLNIDLADDIVAATLLARDGEVTRKA
Sequences:
>Translated_380_residues MHIGVPAETRPYETRVAATPETVKKYVSQGHRVSVQRGAGTAASYLDDAYAAAGAELVDAPAAFGAELVLKVQSPTDSEL PLLKRGSVLVGMLEPFNAENASKLATAGITAFALEAAPRTTRAQSLDVLSSQANIAGYKAVLLAADLYPRFMPMLMTAAG TVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPYETDEEREAAQGVGGYARPMPPSWLA RQSALVHERAKQADVIISTALIPGRPAPTLLSVETVQAMKPGSVVIDLAAGRGPEYEGQRGGNCPLTEADKVVVKHGVTI AGYTNLASMVASDASALYARNLLDFMKLIVTKEGTLNIDLADDIVAATLLARDGEVTRKA >Mature_380_residues MHIGVPAETRPYETRVAATPETVKKYVSQGHRVSVQRGAGTAASYLDDAYAAAGAELVDAPAAFGAELVLKVQSPTDSEL PLLKRGSVLVGMLEPFNAENASKLATAGITAFALEAAPRTTRAQSLDVLSSQANIAGYKAVLLAADLYPRFMPMLMTAAG TVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPYETDEEREAAQGVGGYARPMPPSWLA RQSALVHERAKQADVIISTALIPGRPAPTLLSVETVQAMKPGSVVIDLAAGRGPEYEGQRGGNCPLTEADKVVVKHGVTI AGYTNLASMVASDASALYARNLLDFMKLIVTKEGTLNIDLADDIVAATLLARDGEVTRKA
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=391, Percent_Identity=39.386189258312, Blast_Score=258, Evalue=6e-69, Organism=Homo sapiens, GI122939153, Length=391, Percent_Identity=39.386189258312, Blast_Score=258, Evalue=6e-69, Organism=Escherichia coli, GI1787887, Length=383, Percent_Identity=43.8642297650131, Blast_Score=305, Evalue=2e-84, Organism=Caenorhabditis elegans, GI17550456, Length=377, Percent_Identity=40.3183023872679, Blast_Score=271, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 39742; Mature: 39742
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIGVPAETRPYETRVAATPETVKKYVSQGHRVSVQRGAGTAASYLDDAYAAAGAELVDA CCCCCCCCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHCC PAAFGAELVLKVQSPTDSELPLLKRGSVLVGMLEPFNAENASKLATAGITAFALEAAPRT CHHCCCEEEEEECCCCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHCHHHEEEECCCCC TRAQSLDVLSSQANIAGYKAVLLAADLYPRFMPMLMTAAGTVKAARVLILGAGVAGLQAI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPYETDEEREAAQGVGGYARPMPPSWLA HHHHHHHHHHCCCCCCHHHHHHHHHHCHHEECCCCCCCHHHHHHHCCCCCCCCCCHHHHH RQSALVHERAKQADVIISTALIPGRPAPTLLSVETVQAMKPGSVVIDLAAGRGPEYEGQR HHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEEEECCCCCCCCCCC GGNCPLTEADKVVVKHGVTIAGYTNLASMVASDASALYARNLLDFMKLIVTKEGTLNIDL CCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH ADDIVAATLLARDGEVTRKA HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHIGVPAETRPYETRVAATPETVKKYVSQGHRVSVQRGAGTAASYLDDAYAAAGAELVDA CCCCCCCCCCCCCEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHCC PAAFGAELVLKVQSPTDSELPLLKRGSVLVGMLEPFNAENASKLATAGITAFALEAAPRT CHHCCCEEEEEECCCCCCCCCHHHCCCEEEEECCCCCCCCHHHHHHHCHHHEEEECCCCC TRAQSLDVLSSQANIAGYKAVLLAADLYPRFMPMLMTAAGTVKAARVLILGAGVAGLQAI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEEEECCHHHHHHH ATAKRLGAVIEASDVRPAVKEQIESLGAKFLDVPYETDEEREAAQGVGGYARPMPPSWLA HHHHHHHHHHCCCCCCHHHHHHHHHHCHHEECCCCCCCHHHHHHHCCCCCCCCCCHHHHH RQSALVHERAKQADVIISTALIPGRPAPTLLSVETVQAMKPGSVVIDLAAGRGPEYEGQR HHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEEEECCCCCCCCCCC GGNCPLTEADKVVVKHGVTIAGYTNLASMVASDASALYARNLLDFMKLIVTKEGTLNIDL CCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH ADDIVAATLLARDGEVTRKA HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]