Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yceI [C]

Identifier: 186477279

GI number: 186477279

Start: 2853047

End: 2853610

Strand: Reverse

Name: yceI [C]

Synonym: Bphy_2531

Alternate gene names: 186477279

Gene position: 2853610-2853047 (Counterclockwise)

Preceding gene: 186477280

Following gene: 186477278

Centisome position: 82.02

GC content: 60.64

Gene sequence:

>564_bases
ATGAAGGTATCGTTCTACCGCTACATGCTCGCTGCGTTCGCGGCGGCGTCGCTGGCCGCGTCGGGCAGCGCGTTTGCGCA
AGTCGACGTGGGCAAGAGCACGGTCACGGCGATCTCGAAGCAGATGAACGTGCCCGTCGAAGGCAAGTTCAACAAGTTCA
CCGCGCAGATTGCCTTCGACGCGTCGAAACCGGCGGCGGGCACCGCACAGGTCACGGTCGATACGTCGAGCTACGATCTC
GGCGATGAAACTTACAACGAACAGGTGCGCGGCAAGGAATGGTTCGATTCGAAGACCTATCCGACGGCGACGTTCGTTTC
GAGCGCGATCGCGCCCGCGGGTAACAACCAGTTCAAGGTGACGGGCAAGCTGATTATGAAGGGCAAGTCGCAGACGGTCG
TCGTGCCCGTCACGGTGACGAAACAGGGCGCGGCGCAGGTCTATGACGGTGCGGTGACCGTCAAGCGTTCGCAGTTCGAT
ATCGGCACGGGAGAGTGGAAAGACACGTCGGTGGTTGCCGACGACGTGACCATCAAGTTCCATATCGTCGCTGCAGGCAA
GTGA

Upstream 100 bases:

>100_bases
TGCTGGTCGTGCTGCACGTCGTTGCGGCGCTCAAGCATCAGATTGTCAATCGTGACGGCCTGTTGTCGCGCATGATCCCT
TTCCTCAAATAAGGACAAAC

Downstream 100 bases:

>100_bases
TCCGTGGATTCGTAGCAGTCAGGCAGATAGAAAGGAGAATGAATTGAAACCGATGCGTTTGATTGTGGCTGGCGCGCTGG
CGTCGTCGATGGCGGCGGGC

Product: YceI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKVSFYRYMLAAFAAASLAASGSAFAQVDVGKSTVTAISKQMNVPVEGKFNKFTAQIAFDASKPAAGTAQVTVDTSSYDL
GDETYNEQVRGKEWFDSKTYPTATFVSSAIAPAGNNQFKVTGKLIMKGKSQTVVVPVTVTKQGAAQVYDGAVTVKRSQFD
IGTGEWKDTSVVADDVTIKFHIVAAGK

Sequences:

>Translated_187_residues
MKVSFYRYMLAAFAAASLAASGSAFAQVDVGKSTVTAISKQMNVPVEGKFNKFTAQIAFDASKPAAGTAQVTVDTSSYDL
GDETYNEQVRGKEWFDSKTYPTATFVSSAIAPAGNNQFKVTGKLIMKGKSQTVVVPVTVTKQGAAQVYDGAVTVKRSQFD
IGTGEWKDTSVVADDVTIKFHIVAAGK
>Mature_187_residues
MKVSFYRYMLAAFAAASLAASGSAFAQVDVGKSTVTAISKQMNVPVEGKFNKFTAQIAFDASKPAAGTAQVTVDTSSYDL
GDETYNEQVRGKEWFDSKTYPTATFVSSAIAPAGNNQFKVTGKLIMKGKSQTVVVPVTVTKQGAAQVYDGAVTVKRSQFD
IGTGEWKDTSVVADDVTIKFHIVAAGK

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 19845; Mature: 19845

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSFYRYMLAAFAAASLAASGSAFAQVDVGKSTVTAISKQMNVPVEGKFNKFTAQIAFD
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEEE
ASKPAAGTAQVTVDTSSYDLGDETYNEQVRGKEWFDSKTYPTATFVSSAIAPAGNNQFKV
CCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
TGKLIMKGKSQTVVVPVTVTKQGAAQVYDGAVTVKRSQFDIGTGEWKDTSVVADDVTIKF
EEEEEEECCCCEEEEEEEEECCCCCEEECCEEEEEECEECCCCCCCCCCEEEECCEEEEE
HIVAAGK
EEEEECC
>Mature Secondary Structure
MKVSFYRYMLAAFAAASLAASGSAFAQVDVGKSTVTAISKQMNVPVEGKFNKFTAQIAFD
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEEE
ASKPAAGTAQVTVDTSSYDLGDETYNEQVRGKEWFDSKTYPTATFVSSAIAPAGNNQFKV
CCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE
TGKLIMKGKSQTVVVPVTVTKQGAAQVYDGAVTVKRSQFDIGTGEWKDTSVVADDVTIKF
EEEEEEECCCCEEEEEEEEECCCCCEEECCEEEEEECEECCCCCCCCCCEEEECCEEEEE
HIVAAGK
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA